RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 METTL18O95568 372 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 CLIC3O95833 236 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 CLPTM1O96005 669 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 IGHV1-69P01742 117 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 CPMP14384 443 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF26P17031 533 aaPredicted RBP3.96□□□□□ -1.78
SDCBP-205ENST00000447267 PRKACBP22694 351 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 UQCRC2P22695 453 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 EVI2BP34910 448 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 CETN2P41208 172 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 MMP15P51511 669 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 RAB1AP62820 205 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 KLHL30Q0D2K2 578 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 CSTF3Q12996 717 aaKnown RBP3.96□□□□□ -1.78
SDCBP-205ENST00000447267 BIKQ13323 160 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 PMS2P11Q13670 270 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 THOC5Q13769 683 aaKnown RBP3.96□□□□□ -1.78
SDCBP-205ENST00000447267 BLMHQ13867 455 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 E2F2Q14209 437 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 KRT31Q15323 416 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 NPTX1Q15818 432 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 TPD52L1Q16890 204 aaPredicted RBP3.96□□□□□ -1.78
SDCBP-205ENST00000447267 TMEM95Q3KNT9 176 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 ANKDD1AQ495B1 522 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 ESCO2Q56NI9 601 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 SPRNQ5BIV9 151 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 DUPD1Q68J44 220 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 CORO6Q6QEF8 472 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 BCDIN3DQ7Z5W3 292 aaKnown RBP3.96□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF554Q86TJ5 538 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 NUDT13Q86X67 352 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 CNGA4Q8IV77 575 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 CPNE9Q8IYJ1 553 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 SLC43A2Q8N370 569 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 GTPBP8Q8N3Z3 284 aaPredicted RBP3.96□□□□□ -1.78
SDCBP-205ENST00000447267 C17orf78Q8N4C9 275 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 NRACQ8N912 160 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 OR4N2Q8NGD1 307 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 CD200R1Q8TD46 325 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 P3H4Q92791 437 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 TANKQ92844 425 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 LHX4Q969G2 390 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 VPS39Q96JC1 886 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 ARL5BQ96KC2 179 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 NUDT16L1Q9BRJ7 211 aaKnown RBP3.96□□□□□ -1.78
SDCBP-205ENST00000447267 MCRIP2Q9BUT9 160 aaKnown RBP3.96□□□□□ -1.78
SDCBP-205ENST00000447267 FUT8Q9BYC5 575 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF385DQ9H6B1 395 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 COQ10BQ9H8M1 238 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 LRRC40Q9H9A6 602 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 NOX3Q9HBY0 568 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 TIGARQ9NQ88 270 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 DECR2Q9NUI1 292 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 ANO10Q9NW15 660 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 RHBDL2Q9NX52 303 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 TAAR3PQ9P1P4 343 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF180Q9UJW8 692 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF256Q9Y2P7 627 aaPredicted RBP3.96□□□□□ -1.78
SDCBP-205ENST00000447267 FAM96BQ9Y3D0 163 aa3.96□□□□□ -1.78
SDCBP-205ENST00000447267 A0A087WWL8 130 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 IGLV3-32A0A0A0MS00 114 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 LRRC53A6NM62 1247 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 C17orf100A8MU93 164 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 MYO1GB0I1T2 1018 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 H7C0C1 242 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 SAP18O00422 153 aaKnown RBP3.95□□□□□ -1.78
SDCBP-205ENST00000447267 CASQ2O14958 399 aaPredicted RBP3.95□□□□□ -1.78
SDCBP-205ENST00000447267 CYTIPO60759 359 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 SEC31AO94979 1220 aaKnown RBP3.95□□□□□ -1.78
SDCBP-205ENST00000447267 MBD3O95983 291 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 IGLV1-44P01699 117 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 IGHV2-70P01814 119 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 SLC35E2BP0CK96 405 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 CD22P20273 847 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 DRD5P21918 477 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 HIST1H1TP22492 207 aaPredicted RBP3.95□□□□□ -1.78
SDCBP-205ENST00000447267 ME2P23368 584 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 ATP5F1P24539 256 aaPredicted RBP3.95□□□□□ -1.78
SDCBP-205ENST00000447267 IL12BP29460 328 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 CASP2P42575 452 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 HAAOP46952 286 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 ATP5OP48047 213 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 EMDP50402 254 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 PLTPP55058 493 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 TPTEP56180 551 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 CRADDP78560 199 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 PRB3Q04118 309 aaPredicted RBP3.95□□□□□ -1.78
SDCBP-205ENST00000447267 FHL1Q13642 323 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 TFDP2Q14188 446 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 GNA13Q14344 377 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 TTLL9Q3SXZ7 439 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 TMEM154Q6P9G4 183 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 TMIGD1Q6UXZ0 262 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF600Q6ZNG1 722 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 BTN2A1Q7KYR7 527 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 ZBTB46Q86UZ6 589 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 FAM9CQ8IZT9 166 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 TTLQ8NG68 377 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 OR7G1Q8NGA0 311 aa3.95□□□□□ -1.78
SDCBP-205ENST00000447267 OR5AU1Q8NGC0 362 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms