RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ERRFI1Q9UJM3 462 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 MGAT4BQ9UQ53 548 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC35A3Q9Y2D2 325 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 SNX5Q9Y5X3 404 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 RP1P56715 2156 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 CACNA1EQ15878 2313 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 IGLV3-12A0A075B6K2 115 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 A0A0B4J293 547 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 IGHV3-20A0A0C4DH32 117 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 TRBV4-1A0A0J9YWV2 114 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 A0A1W2PRQ8 180 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 hDV102S1A0JD36 115 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 SH3PXD2BA1X283 911 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 TRAPPC13A5PLN9 417 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CCDC160A6NGH7 325 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CLDN24A6NM45 220 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 B4E171 279 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 DLGAP1O14490 977 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 SCO2O43819 266 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 FCMRO60667 390 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 NOL3O60936 208 aaKnown RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 MITFO75030 526 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 LRP3O75074 770 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 REM1O75628 298 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 STK17BO94768 372 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 UTS2O95399 124 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 SOX14O95416 240 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 ANGPTL1O95841 491 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 NUDT14O95848 222 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 EPPINO95925 133 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CLPTM1O96005 669 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CSTAP01040 98 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 IGLV2-11P01706 119 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 IGHEP01854 428 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CLPSP04118 112 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 GUSBP08236 651 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 GNAO1P09471 354 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 GKN3PP0CG01 181 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CT45A8P0DMV1 189 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CT45A9P0DMV2 189 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 UBL4AP11441 157 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CCL4P13236 92 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CD59P13987 128 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 ITIH1P19827 911 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 GSTM3P21266 225 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 DRD5P21918 477 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CBLP22681 906 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 POU1F1P28069 291 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 SSTR2P30874 369 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 LCN1P31025 176 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 PIGAP37287 484 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 MAP3K8P41279 467 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 TSPAN7P41732 249 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 PPICP45877 212 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 IDH2P48735 452 aaKnown RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 TMED10P49755 219 aaKnown RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 GPR143P51810 404 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 GABARAPL2P60520 117 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CDC42P60953 191 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 COPZ1P61923 177 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 ESRRGP62508 458 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 EEF1A1P68104 462 aaKnown RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 HOXC5Q00444 222 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZFP36L1Q07352 338 aaKnown RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 NPRL3Q12980 569 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 EIF3IQ13347 325 aaKnown RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 RAPSNQ13702 412 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 DGCR6Q14129 220 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 FGFBP1Q14512 234 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 NCF4Q15080 339 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 EBPQ15125 230 aaKnown RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 NPTX1Q15818 432 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 MAPK14Q16539 360 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 ISXQ2M1V0 245 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 IQCCQ4KMZ1 466 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CT45A2Q5DJT8 189 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 HES3Q5TGS1 186 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 KDM4DQ6B0I6 523 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 PODNL1Q6PEZ8 512 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 FAM198BQ6UWH4 519 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CASP12Q6UXS9 341 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 GSG1LQ6UXU4 331 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 HSDL2Q6YN16 418 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CPEB2Q7Z5Q1 589 aaKnown RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 COMTD1Q86VU5 262 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 TMPRSS12Q86WS5 348 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 RBM45Q8IUH3 476 aaKnown RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 APLFQ8IW19 511 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 C9orf40Q8IXQ3 194 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 PRR22Q8IZ63 422 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CDK20Q8IZL9 346 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 PARP8Q8N3A8 854 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 CADM2Q8N3J6 435 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 RFLNBQ8N5W9 214 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF321PQ8N8H1 164 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 BMPERQ8N8U9 685 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 GATSQ8NAP1 163 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 B3GNT7Q8NFL0 401 aa3.41□□□□□ -1.86
HMGB3P20-201ENST00000417997 TSPAN14Q8NG11 270 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms