RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 BDH2Q9BUT1 245 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 OR52D1Q9H346 318 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 CRLF2Q9HC73 371 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 GLTPQ9NZD2 209 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 GRHPRQ9UBQ7 328 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 KCNN3Q9UGI6 736 aa16.89■□□□□ 0.29
HOXA9-202ENST00000396345 CENPBD1B2RD01 187 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 TRMUO75648 421 aaKnown RBP16.88■□□□□ 0.29
HOXA9-202ENST00000396345 PGA4P0DJD7 388 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 PGA3P0DJD8 388 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 CDH2P19022 906 aaPredicted RBP16.88■□□□□ 0.29
HOXA9-202ENST00000396345 GSTM3P21266 225 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 GABRA6Q16445 453 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 CEACAM16Q2WEN9 425 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 FAM205BPQ63HN1 556 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 OR7E24Q6IFN5 339 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 SHQ1Q6PI26 577 aaKnown RBP16.88■□□□□ 0.29
HOXA9-202ENST00000396345 DPY19L2P2Q6ZN68 376 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 ZNF620Q6ZNG0 422 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 C22orf34Q6ZV56 151 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 AMIGO2Q86SJ2 522 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 HS3ST5Q8IZT8 346 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 MARVELD3Q96A59 401 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 NRBF2Q96F24 287 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 ZC3HAV1LQ96H79 300 aaKnown RBP16.88■□□□□ 0.29
HOXA9-202ENST00000396345 SAMD8Q96LT4 415 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 FEVQ99581 238 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 MRPL13Q9BYD1 178 aaKnown RBP16.88■□□□□ 0.29
HOXA9-202ENST00000396345 ULBP2Q9BZM5 246 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 ADAM18Q9Y3Q7 739 aa16.88■□□□□ 0.29
HOXA9-202ENST00000396345 A6NIZ1 184 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 CASKO14936 926 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 SLC6A6P31641 620 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 SH3BGRP55822 239 aaPredicted RBP16.87■□□□□ 0.29
HOXA9-202ENST00000396345 RAP1BP61224 184 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 RAP1AP62834 184 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 STK11Q15831 433 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 RASSF6Q6ZTQ3 369 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 ARIH2OSQ8N7S6 290 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 SYT14Q8NB59 555 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 C1orf162Q8NEQ5 155 aaPredicted RBP16.87■□□□□ 0.29
HOXA9-202ENST00000396345 NOXO1Q8NFA2 376 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 OR5K1Q8NHB7 308 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 ZNF519Q8TB69 540 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 HSD17B8Q92506 261 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 HDAC2Q92769 488 aaKnown RBP16.87■□□□□ 0.29
HOXA9-202ENST00000396345 ZNF837Q96EG3 531 aaPredicted RBP16.87■□□□□ 0.29
HOXA9-202ENST00000396345 Q96M85 177 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 MUS81Q96NY9 551 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 NIPSNAP1Q9BPW8 284 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 EGLN3Q9H6Z9 239 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 NRIP3Q9NQ35 241 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 ZNF226Q9NYT6 803 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 IER3IP1Q9Y5U9 82 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 CDH10Q9Y6N8 788 aa16.87■□□□□ 0.29
HOXA9-202ENST00000396345 CRYBG3Q68DQ2 2970 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 NAV2Q8IVL1 2488 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 ERICH4A6NGS2 130 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 OR5H1A6NKK0 313 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 ANKRD65E5RJM6 399 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 ENTPD5O75356 428 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 THBDP07204 575 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 ANXA8P13928 327 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 PRKACGP22612 351 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 RPS6KA3P51812 740 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 ARF1P84077 181 aaKnown RBP16.86■□□□□ 0.29
HOXA9-202ENST00000396345 COX10Q12887 443 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 HIST3H3Q16695 136 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 TIMM23BQ5SRD1 257 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 GPR139Q6DWJ6 353 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 RPL13AP3Q6NVV1 102 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 LRFN4Q6PJG9 635 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 CD300LDQ6UXZ3 194 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 FAM122BQ7Z309 247 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 P2RY8Q86VZ1 359 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 OR52L1Q8NGH7 329 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 OR1K1Q8NGR3 316 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 CENPNQ96H22 339 aaPredicted RBP16.86■□□□□ 0.29
HOXA9-202ENST00000396345 ZNF570Q96NI8 536 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 KCNK17Q96T54 332 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 ALG12Q9BV10 488 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 IFT27Q9BW83 186 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 ZNF556Q9HAH1 456 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 POFUT2Q9Y2G5 429 aa16.86■□□□□ 0.29
HOXA9-202ENST00000396345 MAGED1Q9Y5V3 778 aaPredicted RBP16.86■□□□□ 0.29
HOXA9-202ENST00000396345 ZNF99A8MXY4 864 aaPredicted RBP16.85■□□□□ 0.29
HOXA9-202ENST00000396345 H3BNX3 289 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 XKRYO14609 159 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 ARHGEF9O43307 516 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 PPP1R3DO95685 299 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 QDPRP09417 244 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 NR2C1P13056 603 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 SDHAP31040 664 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 MYBPC1Q00872 1141 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 CD47Q08722 323 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 TAB1Q15750 504 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 ALKBH2Q6NS38 261 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 HIPK1Q86Z02 1210 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 WFDC8Q8IUA0 241 aa16.85■□□□□ 0.29
HOXA9-202ENST00000396345 CLDN22Q8N7P3 220 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms