RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 CCL8P80075 99 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 BNIP2Q12982 314 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 TRMT5Q32P41 509 aaKnown RBP13.52□□□□□ -0.25
DDX55-202ENST00000354291 C1orf140Q5VVS0 124 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 BLOC1S3Q6QNY0 202 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 C17orf107Q6ZR85 190 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 SERPINA11Q86U17 422 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 BBS10Q8TAM1 723 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 STK35Q8TDR2 534 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 MS4A3Q96HJ5 214 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 ATP6V1G3Q96LB4 118 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 CCDC28BQ9BUN5 200 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 NUP50Q9UKX7 468 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 CHST2Q9Y4C5 530 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 M0QZ24 198 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 NPIPB7O75200 414 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 SEC14L2O76054 403 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 KNG1P01042 644 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 NUDT7P0C024 238 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 PIGFQ07326 219 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 SLC9A3R2Q15599 337 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 ARMCX4Q5H9R4 360 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 LRIF1Q5T3J3 769 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 RETREG3Q86VR2 466 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 EPHX4Q8IUS5 362 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 FUNDC1Q8IVP5 155 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 WDFY1Q8IWB7 410 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 KIR3DL3Q8N743 410 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 MAL2Q969L2 176 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 SPDL1Q96EA4 605 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 ZNF48Q96MX3 618 aaPredicted RBP13.51□□□□□ -0.25
DDX55-202ENST00000354291 LINC00470Q9BZP3 86 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 ZNF385DQ9H6B1 395 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 SLCO1B3Q9NPD5 702 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 CCDC167Q9P0B6 97 aa13.51□□□□□ -0.25
DDX55-202ENST00000354291 FRS3O43559 492 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 ZNF432O94892 652 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 AHSA1O95433 338 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 HLA-HP01893 362 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 CD79AP11912 226 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 HOXB9P17482 250 aaPredicted RBP13.5□□□□□ -0.25
DDX55-202ENST00000354291 AQP5P55064 265 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 NKPD1Q17RQ9 610 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 REEP3Q6NUK4 255 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 SPATC1Q76KD6 591 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 KRT73Q86Y46 540 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 KDM8Q8N371 416 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 MFSD8Q8NHS3 518 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 DYDC1Q8WWB3 177 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 UBE2FQ969M7 185 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 ZNF837Q96EG3 531 aaPredicted RBP13.5□□□□□ -0.25
DDX55-202ENST00000354291 EBF4Q9BQW3 602 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 SPATA5L1Q9BVQ7 753 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 GPR35Q9HC97 309 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 SLC25A37Q9NYZ2 338 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 RPS6KB2Q9UBS0 482 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 ZNF346Q9UL40 294 aaKnown RBP13.5□□□□□ -0.25
DDX55-202ENST00000354291 CORO2BQ9UQ03 480 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 RASD1Q9Y272 281 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 WIPI2Q9Y4P8 454 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 GMEB1Q9Y692 573 aa13.5□□□□□ -0.25
DDX55-202ENST00000354291 ZNF35P13682 527 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 PRKAR1BP31321 381 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 P2RY4P51582 365 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 CLDN17P56750 224 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 GALK2Q01415 458 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 CEACAM16Q2WEN9 425 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 GCNT6Q5T4J0 391 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 TMEM154Q6P9G4 183 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 C5orf46Q6UWT4 87 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 CCDC36Q8IYA8 594 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 GPR137CQ8N3F9 429 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 LSMEM1Q8N8F7 131 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 RABEP2Q9H5N1 569 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 C12orf10Q9HB07 376 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 PLEK2Q9NYT0 353 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 SLAMF8Q9P0V8 285 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 TAAR3PQ9P1P4 343 aa13.49□□□□□ -0.25
DDX55-202ENST00000354291 TESQ9UGI8 421 aaKnown RBP13.49□□□□□ -0.25
DDX55-202ENST00000354291 EVPLLA8MZ36 301 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 RPL36A-HNRNPH2H7BZ11 118 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 TPD52L2O43399 206 aaKnown RBP13.48□□□□□ -0.25
DDX55-202ENST00000354291 OR2T1O43869 369 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 GTF2E2P29084 291 aaKnown RBP13.48□□□□□ -0.25
DDX55-202ENST00000354291 ATP4BP51164 291 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 RPS23P62266 143 aaKnown RBP13.48□□□□□ -0.25
DDX55-202ENST00000354291 HOXC5Q00444 222 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 CDK6Q00534 326 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 TUSC1Q2TAM9 212 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 AGKQ53H12 422 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 PAGE3Q5JUK9 113 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 BRICD5Q6PL45 260 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 MSRB3Q8IXL7 192 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 NFKBIDQ8NI38 313 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 DNAJA4Q8WW22 397 aaPredicted RBP13.48□□□□□ -0.25
DDX55-202ENST00000354291 RAB1CQ92928 201 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 POP5Q969H6 163 aaKnown RBP13.48□□□□□ -0.25
DDX55-202ENST00000354291 SLC25A36Q96CQ1 311 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 TIMD4Q96H15 378 aa13.48□□□□□ -0.25
DDX55-202ENST00000354291 ZNF607Q96SK3 696 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms