RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 OR2T27Q8NH04 317 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 ASB10Q8WXI3 467 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 EMC6Q9BV81 110 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 A0A087WZY1 265 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 A0A1W2PRG6 482 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 SLC22A23A1A5C7 686 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 RENP00797 406 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 RPS19P39019 145 aaKnown RBP16.5■□□□□ 0.23
USP39-201ENST00000323701 RFC3P40938 356 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 OR2B6P58173 313 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 HSF1Q00613 529 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 FMODQ06828 376 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 FOXO1Q12778 655 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 AIMP2Q13155 320 aaKnown RBP16.5■□□□□ 0.23
USP39-201ENST00000323701 MFSD13AQ14CX5 517 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 TOMM20Q15388 145 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 TIMM50Q3ZCQ8 353 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 SLC35D2Q76EJ3 337 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 VASH1Q7L8A9 365 aaPredicted RBP16.5■□□□□ 0.23
USP39-201ENST00000323701 OR2T4Q8NH00 348 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 CDADC1Q9BWV3 514 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 HDHD5Q9BXW7 423 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 NDEL1Q9GZM8 345 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 VSX1Q9NZR4 365 aaPredicted RBP16.5■□□□□ 0.23
USP39-201ENST00000323701 B9D1Q9UPM9 204 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 B3GALT5Q9Y2C3 310 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 MGAQ8IWI9 3026 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 IGKV1D-43A0A0B4J1Z2 117 aa16.49■□□□□ 0.23
USP39-201ENST00000323701 A6NL46 340 aa16.49■□□□□ 0.23
USP39-201ENST00000323701 NKX2-8O15522 239 aa16.49■□□□□ 0.23
USP39-201ENST00000323701 SLC16A7O60669 478 aa16.49■□□□□ 0.23
USP39-201ENST00000323701 OPRL1P41146 370 aa16.49■□□□□ 0.23
USP39-201ENST00000323701 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.49■□□□□ 0.236e-7■□□□□ 9.1
USP39-201ENST00000323701 CRTC2Q53ET0 693 aaPredicted RBP16.49■□□□□ 0.23
USP39-201ENST00000323701 ABHD17BQ5VST6 288 aa16.49■□□□□ 0.23
USP39-201ENST00000323701 ADCK1Q86TW2 530 aa16.49■□□□□ 0.23
USP39-201ENST00000323701 FAM117AQ9C073 453 aa16.49■□□□□ 0.23
USP39-201ENST00000323701 TBCCD1Q9NVR7 557 aa16.49■□□□□ 0.23
USP39-201ENST00000323701 DMXL2Q8TDJ6 3036 aa16.49■□□□□ 0.23
USP39-201ENST00000323701 IGLV1-36A0A0B4J1U3 117 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 ARGFXA6NJG6 315 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 MT-ND5P03915 603 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 HNRNPCP07910 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
USP39-201ENST00000323701 PRKAR1AP10644 381 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 GABRA5P31644 462 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 ACTC1P68032 377 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 ACTA1P68133 377 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 DGUOKQ16854 277 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 CD200R1LQ6Q8B3 271 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 TMPRSS7Q7RTY8 843 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 RNF166Q96A37 237 aaPredicted RBP16.48■□□□□ 0.23
USP39-201ENST00000323701 PELI1Q96FA3 418 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 BARHL1Q9BZE3 327 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 ACOXLQ9NUZ1 547 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 FAIMQ9NVQ4 179 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 MOKQ9UQ07 419 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 NOX1Q9Y5S8 564 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 A0A087WV48 116 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 CD82P27701 267 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 CDONQ4KMG0 1287 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 TMEM91Q6ZNR0 172 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 PXKQ7Z7A4 578 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 GPAT4Q86UL3 456 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 ZNF248Q8NDW4 579 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 KBTBD8Q8NFY9 601 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 SLC25A43Q8WUT9 341 aaPredicted RBP16.48■□□□□ 0.23
USP39-201ENST00000323701 SNRNP27Q8WVK2 155 aaKnown RBP16.48■□□□□ 0.23
USP39-201ENST00000323701 MIB2Q96AX9 1013 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 SSR3Q9UNL2 185 aa16.48■□□□□ 0.23
USP39-201ENST00000323701 SHISA3A0PJX4 238 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 SMIM30A4D0T7 59 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 NPIPA5E9PKD4 350 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 ZNF670-ZNF695F2Z2N8 137 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 SULT2B1O00204 365 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 ATP6V1G1O75348 118 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 MPZL1O95297 269 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 CLEC2LP0C7M8 214 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 TUBA1BP68363 451 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 MXD1Q05195 221 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 MEP1BQ16820 701 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 TMPPEQ6ZT21 453 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 TUBA1AQ71U36 451 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.47■□□□□ 0.23
USP39-201ENST00000323701 CLEC1AQ8NC01 280 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 FAM83FQ8NEG4 500 aaPredicted RBP16.47■□□□□ 0.23
USP39-201ENST00000323701 KCNK17Q96T54 332 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 AMELYQ99218 206 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 FANCFQ9NPI8 374 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 MRPL22Q9NWU5 206 aaKnown RBP16.47■□□□□ 0.23
USP39-201ENST00000323701 TEKT2Q9UIF3 430 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 NPIPA1Q9UND3 350 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 IGHV3-15A0A0B4J1V0 119 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 A0A1W2PNV4 684 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 METTL15A6NJ78 407 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 CD8B2A6NJW9 211 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 CD8BP10966 210 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 PSMB10P40306 273 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 BIDP55957 195 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 CLDN20P56880 219 aa16.47■□□□□ 0.23
USP39-201ENST00000323701 BDH1Q02338 343 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms