RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 GSG1Q2KHT4 349 aa15.81■□□□□ 0.12
TMEM88-201ENST00000301599 ERICH5Q6P6B1 374 aa15.81■□□□□ 0.12
TMEM88-201ENST00000301599 HIPK1Q86Z02 1210 aa15.81■□□□□ 0.12
TMEM88-201ENST00000301599 PCYOX1LQ8NBM8 494 aa15.81■□□□□ 0.12
TMEM88-201ENST00000301599 OR6X1Q8NH79 312 aa15.81■□□□□ 0.12
TMEM88-201ENST00000301599 SORCS2Q96PQ0 1159 aa15.81■□□□□ 0.12
TMEM88-201ENST00000301599 RAB1BQ9H0U4 201 aa15.81■□□□□ 0.12
TMEM88-201ENST00000301599 MYOZ1Q9NP98 299 aaPredicted RBP15.81■□□□□ 0.12
TMEM88-201ENST00000301599 SAR1AQ9NR31 198 aa15.81■□□□□ 0.12
TMEM88-201ENST00000301599 GID8Q9NWU2 228 aa15.81■□□□□ 0.12
TMEM88-201ENST00000301599 ZNF229Q9UJW7 825 aa15.81■□□□□ 0.12
TMEM88-201ENST00000301599 SH3GLB1Q9Y371 365 aa15.81■□□□□ 0.12
TMEM88-201ENST00000301599 CR1P17927 2039 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 LOC100653049A0A140TA62 436 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 MRASO14807 208 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 KRT34O76011 436 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 LY6HO94772 140 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 HLA-HP01893 362 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 VLDLRP98155 873 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 PIGFQ07326 219 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 DAG1Q14118 895 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 CYB5R2Q6BCY4 276 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 PIWIL3Q7Z3Z3 882 aaKnown RBP15.8■□□□□ 0.12
TMEM88-201ENST00000301599 MYPOPQ86VE0 399 aaPredicted RBP15.8■□□□□ 0.12
TMEM88-201ENST00000301599 CARM1Q86X55 608 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 WDFY1Q8IWB7 410 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 LRRC17Q8N6Y2 441 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 C10orf82Q8WW14 230 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 TMEM54Q969K7 222 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 ZNF583Q96ND8 569 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 DOK1Q99704 481 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 FOXB1Q99853 325 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 ZNF426Q9BUY5 554 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 POLR2J2Q9GZM3 115 aaKnown RBP15.8■□□□□ 0.12
TMEM88-201ENST00000301599 POLR2J3Q9H1A7 115 aaKnown RBP15.8■□□□□ 0.12
TMEM88-201ENST00000301599 GLTPQ9NZD2 209 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 SPEF1Q9Y4P9 236 aa15.8■□□□□ 0.12
TMEM88-201ENST00000301599 LOC390937A0A1W2PQ73 354 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 ANKRD65E5RJM6 399 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 KPNA4O00629 521 aaPredicted RBP15.79■□□□□ 0.12
TMEM88-201ENST00000301599 ENTPD5O75356 428 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 ASAH2BP0C7U1 165 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 UMPSP11172 480 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 NR4A1P22736 598 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 PPOXP50336 477 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 CRYBA2P53672 197 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 RAB1AP62820 205 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 LSM11P83369 360 aaKnown RBP eCLIP15.79■□□□□ 0.12
TMEM88-201ENST00000301599 SF3A3Q12874 501 aaKnown RBP eCLIP15.79■□□□□ 0.12
TMEM88-201ENST00000301599 RIPK1Q13546 671 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 REP15Q6BDI9 236 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 TSPYL5Q86VY4 417 aaPredicted RBP15.79■□□□□ 0.12
TMEM88-201ENST00000301599 ZNF566Q969W8 418 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 SLC25A44Q96H78 314 aaPredicted RBP15.79■□□□□ 0.12
TMEM88-201ENST00000301599 PRSS27Q9BQR3 290 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 FBXL3Q9UKT7 428 aa15.79■□□□□ 0.12
TMEM88-201ENST00000301599 SONP18583 2426 aaKnown RBP15.79■□□□□ 0.12
TMEM88-201ENST00000301599 ARFGEF3Q5TH69 2177 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 BLOC1S5-TXNDC5H3BN57 136 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 hCG_2039718K7EN88 272 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 FXYD1O00168 92 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 UBL3O95164 117 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 RAB36O95755 333 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 BCL10O95999 233 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 ERCC1P07992 297 aaPredicted RBP15.78■□□□□ 0.12
TMEM88-201ENST00000301599 B4GALT1P15291 398 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 FUT1P19526 365 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 RBM34P42696 430 aaKnown RBP15.78■□□□□ 0.12
TMEM88-201ENST00000301599 TAS2R41P59536 307 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 ZNF540Q8NDQ6 660 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 NEU4Q8WWR8 484 aaPredicted RBP15.78■□□□□ 0.12
TMEM88-201ENST00000301599 FOXN4Q96NZ1 517 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 PIMREGQ9BSJ6 248 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 NOX3Q9HBY0 568 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 MEPEQ9NQ76 525 aaPredicted RBP15.78■□□□□ 0.12
TMEM88-201ENST00000301599 RIMS3Q9UJD0 308 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 CMAHPQ9Y471 501 aa15.78■□□□□ 0.12
TMEM88-201ENST00000301599 TMEM129A0AVI4 362 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 VWC2LB2RUY7 222 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 OR5F1O95221 314 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 IFNA2P01563 188 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 MT-ND1P03886 318 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 ZNF35P13682 527 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 ZNF14P17017 642 aaPredicted RBP15.77■□□□□ 0.12
TMEM88-201ENST00000301599 NR4A2P43354 598 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 GIPRP48546 466 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 PTDSS1P48651 473 aaKnown RBP15.77■□□□□ 0.12
TMEM88-201ENST00000301599 SNTB2Q13425 540 aaKnown RBP15.77■□□□□ 0.12
TMEM88-201ENST00000301599 CARTPTQ16568 116 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 CHRFAM7AQ494W8 412 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 C6orf52Q5T4I8 152 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 KRT80Q6KB66 452 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 CGB2Q6NT52 195 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 LRFN4Q6PJG9 635 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 DEF8Q6ZN54 512 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 NANOGNBQ7Z5D8 188 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 SKA3Q8IX90 412 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 SVOPLQ8N434 492 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 MS4A3Q96HJ5 214 aa15.77■□□□□ 0.12
TMEM88-201ENST00000301599 ZNF75AQ96N20 296 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms