RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 OR5V1Q9UGF6 321 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 WDFY3Q8IZQ1 3526 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 TRAV8-7A0A075B6U6 113 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 TMED7-TICAM2A0A0A6YYA0 188 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 GIMD1P0DJR0 217 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 ACKR1Q16570 336 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 BTBD16Q32M84 506 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 SFRP4Q6FHJ7 346 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 LRRN1Q6UXK5 716 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 TMPRSS9Q7Z410 1059 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 KCTD20Q7Z5Y7 419 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 LILRB4Q8NHJ6 448 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 SYNPRQ8TBG9 265 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 OIT3Q8WWZ8 545 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 MS4A3Q96HJ5 214 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 SLC7A5P2Q9GIP4 190 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 GHITMQ9H3K2 345 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 ZNF222Q9UK12 451 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 TMED7Q9Y3B3 224 aa16.59■□□□□ 0.25
SHKBP1-201ENST00000291842 H0YC42 278 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 AFF3P51826 1226 aaKnown RBP16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 KLF9Q13886 244 aaPredicted RBP16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 CBFBQ13951 182 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 HACD4Q5VWC8 232 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 GPR139Q6DWJ6 353 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 MAMDC2Q7Z304 686 aaPredicted RBP16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 ADGRG3Q86Y34 549 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 PRSS35Q8N3Z0 413 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 OR11H7Q8NGC8 314 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 OR52I2Q8NH67 350 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 SCMH1Q96GD3 660 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 C12orf10Q9HB07 376 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 SLC22A11Q9NSA0 550 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 KLK11Q9UBX7 282 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 RCE1Q9Y256 329 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 NUBP2Q9Y5Y2 271 aa16.58■□□□□ 0.25
SHKBP1-201ENST00000291842 CCDC85CA6NKD9 419 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 ZNF593O00488 134 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 FABP7O15540 132 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 EIF4E2O60573 245 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 SLC16A7O60669 478 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 DMWDQ09019 674 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 PLA2G7Q13093 441 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 MELKQ14680 651 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 TMEM255AQ5JRV8 349 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 SDR16C5Q8N3Y7 309 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 PMEPA1Q969W9 287 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 PPP1R14AQ96A00 147 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 CHRDQ9H2X0 955 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 SLA2Q9H6Q3 261 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 GTF2A1LQ9UNN4 478 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 FRYLO94915 3013 aa16.58■□□□□ 0.24
SHKBP1-201ENST00000291842 A0A1W2PQD3 144 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 OR4C45A6NMZ5 311 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 TO15178 435 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 FADS1O60427 444 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 GMDSO60547 372 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 ZNF354AO60765 605 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 TMIGD3P0DMS9 266 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 IL11P20809 199 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 PNLIPRP2P54317 469 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 MEP1BQ16820 701 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 PWWP2BQ6NUJ5 590 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 TMPRSS12Q86WS5 348 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 SLC38A9Q8NBW4 561 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 TMEM106AQ96A25 262 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 CCDC74AQ96AQ1 378 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 NKX3-1Q99801 234 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 NDEL1Q9GZM8 345 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 PCED1AQ9H1Q7 454 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 HSPB11Q9Y547 144 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 GSTZ1O43708 216 aaPredicted RBP16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 CXCL3P19876 107 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 P2RX1P51575 399 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 POLR2HP52434 150 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 SMAD2Q15796 467 aaKnown RBP16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 C1orf140Q5VVS0 124 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 LAMTOR1Q6IAA8 161 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 LIX1LQ8IVB5 337 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 ZNF441Q8N8Z8 693 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 GPR119Q8TDV5 335 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 DEDD2Q8WXF8 326 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 SLITRK2Q9H156 845 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 OR51J1Q9H342 316 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 NIPAL2Q9H841 368 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 FLVCR2Q9UPI3 526 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 B9D1Q9UPM9 204 aa16.57■□□□□ 0.24
SHKBP1-201ENST00000291842 ASCC3Q8N3C0 2202 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 PRSS37A4D1T9 235 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 HLA-DOBP13765 273 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 STOMP27105 288 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 RPL27P61353 136 aaKnown RBP16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 INSM1Q01101 510 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 TNK1Q13470 666 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 SGCBQ16585 318 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 COL28A1Q2UY09 1125 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 FAM69AQ5T7M9 428 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 BAIAP2L2Q6UXY1 529 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 COX15Q7KZN9 410 aa16.56■□□□□ 0.24
SHKBP1-201ENST00000291842 OTOSQ8NHW6 89 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms