RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 SLC46A1Q96NT5 459 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 PRDM9Q9NQV7 894 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 ALKBH4Q9NXW9 302 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 MTCL1Q9Y4B5 1905 aaKnown RBP11.42□□□□□ -0.58
UBXN4-201ENST00000272638 A0A087WUJ7 227 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 C4BPBP20851 252 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 STARP49675 285 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 GNG2P59768 71 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 BEX5Q5H9J7 111 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 GLT8D1Q68CQ7 371 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 STT3BQ8TCJ2 826 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 TAAR8Q969N4 342 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 HYLS1Q96M11 299 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 VSTM2LQ96N03 204 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 F5H5K5 113 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 SCRG1O75711 98 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 UBL3O95164 117 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 MPZL1O95297 269 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 GLO1Q04760 184 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 Q499Y3 187 aa11.42□□□□□ -0.58
UBXN4-201ENST00000272638 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.42□□□□□ -0.58
UBXN4-201ENST00000272638 M0QYG6 137 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 P2RY10O00398 339 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 CREBL2O60519 120 aaPredicted RBP11.41□□□□□ -0.58
UBXN4-201ENST00000272638 CYB5AP00167 134 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 KLK3P07288 261 aaPredicted RBP11.41□□□□□ -0.58
UBXN4-201ENST00000272638 IFNGR1P15260 489 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 CDK2P24941 298 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 PRSS3P35030 304 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 ACAA2P42765 397 aaKnown RBP11.41□□□□□ -0.58
UBXN4-201ENST00000272638 GMFBP60983 142 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 FMODQ06828 376 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 CBFBQ13951 182 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 COL28A1Q2UY09 1125 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 MANEAQ5SRI9 462 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 PTCRAQ6ISU1 281 aaPredicted RBP11.41□□□□□ -0.58
UBXN4-201ENST00000272638 LRRC20Q8TCA0 184 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 SLCO1C1Q9NYB5 712 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 ABRACLQ9P1F3 81 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 TMEM184BQ9Y519 407 aaPredicted RBP11.41□□□□□ -0.58
UBXN4-201ENST00000272638 A0A1B0GVI7 797 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 PGAM2P15259 253 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 DDOSTP39656 456 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 GUCA2AQ02747 115 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 DNM1P34Q6PK57 102 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 OR13C9Q8NGT0 318 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 CHAC2Q8WUX2 184 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 SNX18Q96RF0 628 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 DCTN6O00399 190 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 TSPAN4O14817 238 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 UBE2IP63279 158 aaKnown RBP11.41□□□□□ -0.58
UBXN4-201ENST00000272638 TMEM176BQ3YBM2 270 aaPredicted RBP11.41□□□□□ -0.58
UBXN4-201ENST00000272638 PLCZ1Q86YW0 608 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 ELMOD2Q8IZ81 293 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 OR1L3Q8NH93 324 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 SHDQ96IW2 340 aa11.41□□□□□ -0.58
UBXN4-201ENST00000272638 A0A087WV48 116 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 IGHV1OR15-9A0A0B4J2B8 117 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 ALOX12BO75342 701 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 POU3F4P49335 361 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 ZNF117Q03924 483 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.4□□□□□ -0.587e-31■■□□□ 14.3
UBXN4-201ENST00000272638 CCDC58Q4VC31 144 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 GLYATL3Q5SZD4 288 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 SLC22A10Q63ZE4 541 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 FAM199XQ6PEV8 388 aaPredicted RBP11.4□□□□□ -0.58
UBXN4-201ENST00000272638 ADAMTS18Q8TE60 1221 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 TM4SF19Q96DZ7 209 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 NXF2Q9GZY0 626 aaKnown RBP11.4□□□□□ -0.58
UBXN4-201ENST00000272638 EXOGQ9Y2C4 368 aaKnown RBP11.4□□□□□ -0.58
UBXN4-201ENST00000272638 NUBP2Q9Y5Y2 271 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 GOSR2O14653 212 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 PPICP45877 212 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 BIDP55957 195 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 C1orf140Q5VVS0 124 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 TDHQ8IZJ6 230 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 OR51A4Q8NGJ6 313 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 ADAMTS14Q8WXS8 1223 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 CCDC74AQ96AQ1 378 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 DDOQ99489 341 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 RBM24Q9BX46 236 aaKnown RBP11.4□□□□□ -0.58
UBXN4-201ENST00000272638 CYSLTR2Q9NS75 346 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 TRAPPC4Q9Y296 219 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 SF3B6Q9Y3B4 125 aaKnown RBP11.4□□□□□ -0.58
UBXN4-201ENST00000272638 TGFBR3LH3BV60 316 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 SLC43A1O75387 559 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 WNT1P04628 370 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 AKR1C4P17516 323 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 PSMB1P20618 241 aaKnown RBP11.4□□□□□ -0.58
UBXN4-201ENST00000272638 BCKDHBP21953 392 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 SDHAP31040 664 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 ZNF74Q16587 644 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 PRTGQ2VWP7 1150 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 DCXRQ7Z4W1 244 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 OR52B4Q8NGK2 314 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 OR56B4Q8NH76 319 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 ZNRF4Q8WWF5 429 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 ZNF764Q96H86 408 aaPredicted RBP11.4□□□□□ -0.58
UBXN4-201ENST00000272638 WDFY2Q96P53 400 aa11.4□□□□□ -0.58
UBXN4-201ENST00000272638 MED18Q9BUE0 208 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 146.7 ms