RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 FTCDNL1E5RQL4 147 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 ZNF208O43345 1280 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 OR2J2O76002 312 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 PAHP00439 452 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 KLK3P07288 261 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 SYPP08247 313 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 ALOX5APP20292 161 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 MAP2K3P46734 347 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 ZNF41P51814 821 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 DLX5P56178 289 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 SF3A2Q15428 464 aaKnown RBP11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 CEP78Q5JTW2 689 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 ARSKQ6UWY0 536 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 RDH10Q8IZV5 341 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 ZBTB8BQ8NAP8 495 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 MFSD8Q8NHS3 518 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 RNF166Q96A37 237 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 NXPE2Q96DL1 559 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 KCNJ15Q99712 375 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 GTPBP2Q9BX10 602 aaKnown RBP11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 DEFB126Q9BYW3 111 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 MMP28Q9H239 520 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 METTL7AQ9H8H3 244 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 BRD7Q9NPI1 651 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 VSX1Q9NZR4 365 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 VDAC3Q9Y277 283 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 AK6Q9Y3D8 172 aaKnown RBP11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 ANKRD61A6NGH8 418 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 TFECO14948 347 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 SLC16A7O60669 478 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 FZD7O75084 574 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 ITGA10O75578 1167 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 ABHD16AO95870 558 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 ATF1P18846 271 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 MAPK3P27361 379 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 MAP2K6P52564 334 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 BICRALQ6AI39 1079 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 SLC23A3Q6PIS1 610 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 SYT9Q86SS6 491 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 UBE2J2Q8N2K1 259 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 OTOSQ8NHW6 89 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 ASB17Q8WXJ9 295 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 NSMAFQ92636 917 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 RELTQ969Z4 430 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 DERL3Q96Q80 235 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 HDHD2Q9H0R4 259 aa11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 AKIRIN1Q9H9L7 192 aaPredicted RBP11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 RBFOX1Q9NWB1 397 aaKnown RBP11.66□□□□□ -0.54
SPTLC1-201ENST00000262554 SLC22A23A1A5C7 686 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 MEIOCA2RUB1 952 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 A6NIZ1 184 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 ZNF593O00488 134 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 LYRM1O43325 122 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 ZNF432O94892 652 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 GPANK1O95872 356 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 FBXO45P0C2W1 286 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 SNRPBP14678 240 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 KIR2DL3P43628 341 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 RAP1BP61224 184 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 RAP1AP62834 184 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 INSM1Q01101 510 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 ZFP36L1Q07352 338 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 PUDPQ08623 228 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 ZP4Q12836 540 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 FOXF1Q12946 379 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 CBX3Q13185 183 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 OR7A5Q15622 319 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 BTBD16Q32M84 506 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 Q499Y3 187 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 ZNF57Q68EA5 555 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 PYHIN1Q6K0P9 492 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 LYPD8Q6UX82 237 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 H1FNTQ75WM6 255 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 BMPERQ8N8U9 685 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 ZNF671Q8TAW3 534 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 HSD17B8Q92506 261 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 RGP1Q92546 391 aaPredicted RBP11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 ZC3HAV1LQ96H79 300 aaKnown RBP11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 MAP6Q96JE9 813 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 NPAS1Q99742 590 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 WACQ9BTA9 647 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 COMMD4Q9H0A8 199 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 SLITRK2Q9H156 845 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 RNF121Q9H920 327 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 FRRS1LQ9P0K9 344 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 WIF1Q9Y5W5 379 aa11.65□□□□□ -0.54
SPTLC1-201ENST00000262554 LOC102723996A0A087X1L8 192 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 IGLV3-32A0A0A0MS00 114 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 IGLV1-36A0A0B4J1U3 117 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 ACOD1A6NK06 481 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 CENPBD1B2RD01 187 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 B4DXG7 233 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 C9J4A7 227 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 PIN1P1O15428 100 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 GDF9O60383 454 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 TMEM127O75204 238 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 CCNKO75909 580 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 TFPIP10646 304 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 CD46P15529 392 aa11.64□□□□□ -0.55
SPTLC1-201ENST00000262554 ZNF28P17035 718 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms