RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 CASP8AP2Q9UKL3 1982 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 TRPM6Q9BX84 2022 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 TRAV8-7A0A075B6U6 113 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 PIN1P1O15428 100 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 ALOX12BO75342 701 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 ACAA1P09110 424 aaPredicted RBP14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 ILF3Q12906 894 aaKnown RBP eCLIP14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 INTS14Q96SY0 518 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 CKLFQ9UBR5 152 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 RFPL4AA6NLU0 287 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 RFPL4AL1F8VTS6 287 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 GLI4P10075 376 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 IL9P15248 144 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 ITGB8P26012 769 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 MST1P26927 711 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 ADH6P28332 368 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 S100A2P29034 98 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 ID4P47928 161 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 NANOS3P60323 173 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 RAB11BQ15907 218 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 SOCS4Q8WXH5 440 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 MAP3K3Q99759 626 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 ALG12Q9BV10 488 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 KIAA0100Q14667 2235 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 IGLON5A6NGN9 336 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 A6NLC8 198 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 TMEM189-UBE2V1I3L0A0 370 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 CDC40O60508 579 aaKnown RBP eCLIP14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 NDUFB2O95178 105 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 OR2T7P0C7T2 308 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 TPT1P13693 172 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 CTXN1P60606 82 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 DCST2Q5T1A1 773 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 GABRG1Q8N1C3 465 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 GALNT16Q8N428 558 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 OR13C9Q8NGT0 318 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 OR2T27Q8NH04 317 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 IRF7Q92985 503 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 HAVCR1Q96D42 359 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 CMBLQ96DG6 245 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 SGIP1Q9BQI5 828 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 PRSS16Q9NQE7 514 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 RASL12Q9NYN1 266 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 ABT1Q9ULW3 272 aaKnown RBP14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 HS3ST2Q9Y278 367 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 SIGLEC7Q9Y286 467 aa14.56□□□□□ -0.08
PRPF40B-201ENST00000261897 H7C1Q1 480 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 PTAFRP25105 342 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 SHC2P98077 582 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 BDH1Q02338 343 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 DHRS2Q13268 280 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 UBE3DQ7Z6J8 389 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 ZNF547Q8IVP9 402 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 NAXEQ8NCW5 288 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 FAM174AQ8TBP5 190 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 RHOVQ96L33 236 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 CLCC1Q96S66 551 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 EXOSC3Q9NQT5 275 aaKnown RBP14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 SLC22A13Q9Y226 551 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 OR2M5A3KFT3 312 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 FRKP42685 505 aaPredicted RBP14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 SRSF5Q13243 272 aaKnown RBP14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 GLYATL3Q5SZD4 288 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 FAM109BQ6ICB4 259 aaPredicted RBP14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 OVCH1Q7RTY7 1134 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 NRROSQ86YC3 692 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 SLC35F3Q8IY50 421 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 KCNRGQ8N5I3 272 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 OR6K3Q8NGY3 331 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 ZNF563Q8TA94 476 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 GLYATL2Q8WU03 294 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 IGSF21Q96ID5 467 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 CCDC3Q9BQI4 270 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 PIGQQ9BRB3 760 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 HMSDA8MTL9 139 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 ACTL6AO96019 429 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 KNG1P01042 644 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 RNF224P0DH78 156 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 Q499Y3 187 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 CYB5R2Q6BCY4 276 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 MFSD12Q6NUT3 480 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 ZNF101Q8IZC7 436 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 TCTEX1D2Q8WW35 142 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 DTD2Q96FN9 168 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 SDF2Q99470 211 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 BCL2L10Q9HD36 194 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 TAS2R8Q9NYW2 309 aa14.55□□□□□ -0.08
PRPF40B-201ENST00000261897 BHLHE40O14503 412 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 CPN1P15169 458 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 NDUFS1P28331 727 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 CLEC9AQ6UXN8 241 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 DND1Q8IYX4 353 aaKnown RBP14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 FAM24BQ8N5W8 94 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 JSRP1Q96MG2 331 aaPredicted RBP14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 PRO1933Q9H354 126 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 LHX9Q9NQ69 397 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 PUS1Q9Y606 427 aaKnown RBP eCLIP14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 UNC80Q8N2C7 3258 aa14.54□□□□□ -0.08
PRPF40B-201ENST00000261897 TRAV1-2A0A0B4J238 106 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms