RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 GPR50Q13585 617 aa16.26■□□□□ 0.19
VIM-201ENST00000224237 RSPO4Q2I0M5 234 aaPredicted RBP16.26■□□□□ 0.19
VIM-201ENST00000224237 SOWAHCQ53LP3 525 aaPredicted RBP16.26■□□□□ 0.19
VIM-201ENST00000224237 AGAP7PQ5VUJ5 663 aa16.26■□□□□ 0.19
VIM-201ENST00000224237 SLC16A9Q7RTY1 509 aa16.26■□□□□ 0.19
VIM-201ENST00000224237 OR14L1PQ8NHC6 308 aa16.26■□□□□ 0.19
VIM-201ENST00000224237 KCNE4Q8WWG9 221 aa16.26■□□□□ 0.19
VIM-201ENST00000224237 SLC39A7Q92504 469 aa16.26■□□□□ 0.19
VIM-201ENST00000224237 C4orf36Q96KX1 117 aa16.26■□□□□ 0.19
VIM-201ENST00000224237 AGAP4Q96P64 663 aa16.26■□□□□ 0.19
VIM-201ENST00000224237 A0A1B0GVG6 124 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 SLC22A23A1A5C7 686 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 AQP7P3A6NL99 342 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 DLL1O00548 723 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 CLPXO76031 633 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 INHBBP09529 407 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 CELP19835 753 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 SERPINB10P48595 397 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 ENTPD1P49961 510 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 BLVRAP53004 296 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 TAS2R43P59537 309 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 FOXO1Q12778 655 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 LYPD4Q6UWN0 246 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 SSX6Q7RTT6 188 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 UEVLDQ8IX04 471 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 TIGD4Q8IY51 512 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 SYS1Q8N2H4 156 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 ZNF511Q8NB15 262 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 FAM83FQ8NEG4 500 aaPredicted RBP16.25■□□□□ 0.19
VIM-201ENST00000224237 OR2M7Q8NG81 312 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 RERGLQ9H628 205 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 B9D1Q9UPM9 204 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 SF3B6Q9Y3B4 125 aaKnown RBP16.25■□□□□ 0.19
VIM-201ENST00000224237 EIF1BO60739 113 aaKnown RBP16.25■□□□□ 0.19
VIM-201ENST00000224237 RFPL3SP0C7P2 107 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 GDF1P27539 372 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 CRABP1P29762 137 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 HCCSP53701 268 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 B3GALT5-AS1P59052 145 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 CSNK2A1P68400 391 aaPredicted RBP16.25■□□□□ 0.19
VIM-201ENST00000224237 CDONQ4KMG0 1287 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 VASH1Q7L8A9 365 aaPredicted RBP16.25■□□□□ 0.19
VIM-201ENST00000224237 YRDCQ86U90 279 aaKnown RBP16.25■□□□□ 0.19
VIM-201ENST00000224237 RFLNBQ8N5W9 214 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 ZFP41Q8N8Y5 198 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 SNX33Q8WV41 574 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 OR2B2Q9GZK3 357 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 RNF167Q9H6Y7 350 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 B4GALT7Q9UBV7 327 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 ZMIZ1Q9ULJ6 1067 aa16.25■□□□□ 0.19
VIM-201ENST00000224237 PINLYPA6NC86 204 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 OR5H15A6NDH6 313 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 TRABD2BA6NFA1 517 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 A6NL46 340 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 ZNF670-ZNF695F2Z2N8 137 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 J3QLW9 94 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 SLC16A7O60669 478 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 ZNF19P17023 458 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 OR12D2P58182 307 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 RPS25P62851 125 aaKnown RBP16.24■□□□□ 0.19
VIM-201ENST00000224237 RUNX1T1Q06455 604 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 TMEM225Q6GV28 225 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 DNM1P34Q6PK57 102 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 HDDC2Q7Z4H3 204 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 BORCS5Q969J3 196 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 KLHL15Q96M94 604 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 OXGR1Q96P68 337 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 KCNK17Q96T54 332 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 MNTQ99583 582 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 MARCH7Q9H992 704 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 MED29Q9NX70 200 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 PLA2G3Q9NZ20 509 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 COPS3Q9UNS2 423 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 LOC400499M0QZD8 3231 aa16.24■□□□□ 0.19
VIM-201ENST00000224237 LOC102725191A0A1B0GVB3 256 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 TRAPPC6AO75865 159 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 CTLA4P16410 223 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 SPINK2P20155 84 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 H3F3AP84243 136 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 C11orf91Q3C1V1 193 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 GPAT4Q86UL3 456 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 TMEM203Q969S6 136 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 SFXN2Q96NB2 322 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 INTS14Q96SY0 518 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 COQ7Q99807 217 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 RNF32Q9H0A6 362 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 OCEL1Q9H607 264 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 KLK13Q9UKR3 277 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 CFAP47Q6ZTR5 3102 aa16.23■□□□□ 0.19
VIM-201ENST00000224237 IGLV1-36A0A0B4J1U3 117 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 BIDP55957 195 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 CLN3Q13286 438 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 MFAP5Q13361 173 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 CD200R1LQ6Q8B3 271 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 NHLRC1Q6VVB1 395 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 CDC20BQ86Y33 519 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 SULF2Q8IWU5 870 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 TRMT61AQ96FX7 289 aaKnown RBP16.22■□□□□ 0.19
VIM-201ENST00000224237 TXNDC15Q96J42 360 aa16.22■□□□□ 0.19
VIM-201ENST00000224237 HES7Q9BYE0 225 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms