RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 VAPAQ9P0L0 249 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 RAB26Q9ULW5 256 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 EXO1Q9UQ84 846 aaKnown RBP4.22□□□□□ -1.73
VPS29-212ENST00000621131 MRPS33Q9Y291 106 aaKnown RBP4.22□□□□□ -1.73
VPS29-212ENST00000621131 SNX8Q9Y5X2 465 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 CSNK1G3Q9Y6M4 447 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 DOCK9Q9BZ29 2069 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 FBN2P35556 2912 aa4.22□□□□□ -1.73
VPS29-212ENST00000621131 RELNP78509 3460 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 A0A0A6YYD5 115 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 A0A0J9YVX5 310 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 LOC101059948A0A1B0GTJ6 334 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 A0A1W2PN81 502 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 OR2A25A4D2G3 310 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 LRIT2A6NDA9 550 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 C10orf142B7Z368 130 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 LMO7DNF2Z398 122 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 DUX1O43812 170 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 TPST1O60507 370 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 E2F6O75461 281 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ERAL1O75616 437 aaKnown RBP4.21□□□□□ -1.74
VPS29-212ENST00000621131 CREG1O75629 220 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 CDC123O75794 336 aaPredicted RBP4.21□□□□□ -1.74
VPS29-212ENST00000621131 TPPPO94811 219 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ZNF682O95780 498 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 C6orf47O95873 294 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 SERPINA1P01009 418 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 CST1P01037 141 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 GBAP04062 536 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 PROS1P07225 676 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 LAMP1P11279 417 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 UQCRBP14927 111 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 CD1EP15812 388 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 NCK1P16333 377 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 GPX2P18283 190 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 IL1RNP18510 177 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 CSNK2A2P19784 350 aaPredicted RBP4.21□□□□□ -1.74
VPS29-212ENST00000621131 MAGP20916 626 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 HIST1H1TP22492 207 aaPredicted RBP4.21□□□□□ -1.74
VPS29-212ENST00000621131 ATP5A1P25705 553 aaKnown RBP4.21□□□□□ -1.74
VPS29-212ENST00000621131 PEBP1P30086 187 aaKnown RBP4.21□□□□□ -1.74
VPS29-212ENST00000621131 HOXA6P31267 233 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 MPIP34949 423 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 CHRNA7P36544 502 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 CAPZBP47756 277 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 DHPSP49366 369 aaPredicted RBP4.21□□□□□ -1.74
VPS29-212ENST00000621131 NCBP2P52298 156 aaKnown RBP eCLIP4.21□□□□□ -1.74
VPS29-212ENST00000621131 TPD52P55327 224 aaPredicted RBP4.21□□□□□ -1.74
VPS29-212ENST00000621131 B3GALT5-AS1P59052 145 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 DSTNP60981 165 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 SNRPEP62304 92 aaKnown RBP4.21□□□□□ -1.74
VPS29-212ENST00000621131 BTN3A2P78410 334 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 HPCAP84074 193 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 TNFRSF17Q02223 184 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 HSPB3Q12988 150 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 SLAMF1Q13291 335 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 SCARB2Q14108 478 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 SIM2Q14190 667 aaPredicted RBP4.21□□□□□ -1.74
VPS29-212ENST00000621131 SELPLGQ14242 412 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 RGNQ15493 299 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ATP6AP1Q15904 470 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ZIC1Q15915 447 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 LRRC36Q1X8D7 754 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ADPRMQ3LIE5 342 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 C14orf28Q4W4Y0 310 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ZNF542PQ5EBM4 170 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 LPCAT4Q643R3 524 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ADNP2Q6IQ32 1131 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 KRT80Q6KB66 452 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ANKRD26P1Q6NSI1 321 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ZBTB49Q6ZSB9 765 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 SZRD1Q7Z422 152 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 CYP4Z1Q86W10 505 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 MCEMP1Q8IX19 187 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 CLECL1Q8IZS7 167 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 SVOPLQ8N434 492 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 TMEM105Q8N8V8 129 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ANKFN1Q8N957 763 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ACOT4Q8N9L9 421 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ZNF555Q8NEP9 628 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 OR6C4Q8NGE1 309 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 GOT1L1Q8NHS2 421 aaPredicted RBP4.21□□□□□ -1.74
VPS29-212ENST00000621131 FBXO30Q8TB52 745 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 SFXN5Q8TD22 340 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ZFP90Q8TF47 636 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 CANT1Q8WVQ1 401 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 TM4SF18Q96CE8 201 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 C11orf24Q96F05 449 aaPredicted RBP4.21□□□□□ -1.74
VPS29-212ENST00000621131 ZNF607Q96SK3 696 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 SEPHS2Q99611 448 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 SRSF8Q9BRL6 282 aaKnown RBP4.21□□□□□ -1.74
VPS29-212ENST00000621131 INPP5KQ9BT40 448 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 OSBPL11Q9BXB4 747 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 OSBPL10Q9BXB5 764 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 FANCEQ9HB96 536 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 ANKHQ9HCJ1 492 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 LYRM4Q9HD34 91 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 BATF3Q9NR55 127 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 SLC7A10Q9NS82 523 aa4.21□□□□□ -1.74
VPS29-212ENST00000621131 SOHLH2Q9NX45 425 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms