RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ATP5A1P25705 553 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 EEF1DP29692 281 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 PPP2R1BP30154 601 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 CYB561P49447 251 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 HLCSP50747 726 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 HNRNPFP52597 415 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 PLA2G16P53816 162 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 LIM2P55344 173 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 BTN3A2P78410 334 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 RBPJQ06330 500 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF33BQ06732 778 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 SERTAD2Q14140 314 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 RASA2Q15283 850 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR1C1Q15619 314 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 CTU2Q2VPK5 515 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 GGTA1PQ4G0N0 100 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 KHDRBS2Q5VWX1 349 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR4C11Q6IEV9 310 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 ADNP2Q6IQ32 1131 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 SLC25A25Q6KCM7 469 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 TIFABQ6ZNK6 161 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 Q6ZPB1 254 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 RBPMS2Q6ZRY4 209 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 TRMT10CQ7L0Y3 403 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 MMD2Q8IY49 270 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 SLC34A3Q8N130 599 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZCCHC7Q8N3Z6 543 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 TEX9Q8N6V9 391 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 CEP112Q8N8E3 955 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 LSMEM1Q8N8F7 131 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 ACOT4Q8N9L9 421 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZFP62Q8NB50 900 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 NOA1Q8NC60 698 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 MORN4Q8NDC4 146 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 KIF18AQ8NI77 898 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 NUBPLQ8TB37 319 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 DCAKDQ8WVC6 231 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 KCTD4Q8WVF5 259 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 VMP1Q96GC9 406 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 CNDP1Q96KN2 507 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 SIGLEC12Q96PQ1 595 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 MRPL57Q9BQC6 102 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 PELOQ9BRX2 385 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 CENPKQ9BS16 269 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF717Q9BY31 904 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 DEFB126Q9BYW3 111 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 TXLNGYQ9BZA5 131 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 EGLN1Q9GZT9 426 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 PHF11Q9UIL8 331 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF223Q9UK11 482 aaPredicted RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 WDR83OSQ9Y284 106 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 YARS2Q9Y2Z4 477 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 SPACA6W5XKT8 324 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 ANKRD17O75179 2603 aaKnown RBP3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 LRBAP50851 2863 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 MYO9AB2RTY4 2548 aa3.08□□□□□ -1.92
CKS1BP3-201ENST00000600888 MPDZO75970 2070 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ANKHD1Q8IWZ3 2542 aaKnown RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 A0A0A6YYD5 115 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 A0A1B0GU03 582 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 CYSRT1A8MQ03 144 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 KLRC4-KLRK1H3BQV0 150 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 UBE2CO00762 179 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 PLPP1O14494 284 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 OR7A17O14581 309 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ARPC2O15144 300 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 LRRTM2O43300 516 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ZNF500O60304 480 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 MYO1DO94832 1006 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 SIX3O95343 332 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 CLDN9O95484 217 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ACSL3O95573 720 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 CLDN1O95832 211 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 IGKV3-11P04433 115 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 CSN3P07498 182 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 UQCRHP07919 91 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 GFAPP14136 432 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ACHEP22303 614 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 CPT2P23786 658 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 GCAP28676 217 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 TLX1P31314 330 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 CA7P43166 264 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ALDH3A2P51648 485 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 PPP5CP53041 499 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 NAA20P61599 178 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 TNFRSF17Q02223 184 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 OC90Q02509 493 aaPredicted RBP3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 STX4Q12846 297 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 SLAMF1Q13291 335 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 ART3Q13508 389 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 HYAL4Q2M3T9 481 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 FBXO48Q5FWF7 155 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 LGSNQ5TDP6 509 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 LCN1P1Q5VSP4 162 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 SPINK14Q6IE38 97 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 XKRXQ6PP77 449 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 SLC25A47Q6Q0C1 308 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 HSDL2Q6YN16 418 aa3.07□□□□□ -1.92
CKS1BP3-201ENST00000600888 RGS9BPQ6ZS82 235 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms