RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ZNF354AO60765 605 aaPredicted RBP9.38□□□□□ -0.91
VPS25-203ENST00000589520 KRT8P05787 483 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 UMODP07911 640 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 ZNF806P0C7X5 589 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 TGM1P22735 817 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 AHCYP23526 432 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 MAPK3P27361 379 aaPredicted RBP9.38□□□□□ -0.91
VPS25-203ENST00000589520 PTGDSP41222 190 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 SSR4P51571 173 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 MXD1Q05195 221 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 PUDPQ08623 228 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 ACKR1Q16570 336 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 ZNF239Q16600 458 aaKnown RBP9.38□□□□□ -0.91
VPS25-203ENST00000589520 ACSM3Q53FZ2 586 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 YIF1BQ5BJH7 314 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 ZNF684Q5T5D7 378 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 HBMQ6B0K9 141 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 UNQ9370/PRO34162Q6UXP9 181 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 PRR23CQ6ZRP0 262 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 CEACAM19Q7Z692 300 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 CDC20BQ86Y33 519 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 LYSMD2Q8IV50 215 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 TIGD4Q8IY51 512 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 FADS6Q8N9I5 356 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 OR2M3Q8NG83 312 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 OR4K17Q8NGC6 315 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 ZNF519Q8TB69 540 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 RPS4Y2Q8TD47 263 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 THAP3Q8WTV1 239 aaPredicted RBP9.38□□□□□ -0.91
VPS25-203ENST00000589520 ASB15Q8WXK1 588 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 GHSRQ92847 366 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 ATOH1Q92858 354 aaPredicted RBP9.38□□□□□ -0.91
VPS25-203ENST00000589520 PELI1Q96FA3 418 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 DIRAS2Q96HU8 199 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 INTS14Q96SY0 518 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 ANGPTL4Q9BY76 406 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.38□□□□□ -0.91
VPS25-203ENST00000589520 RERGLQ9H628 205 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 SRA1Q9HD15 236 aaKnown RBP9.38□□□□□ -0.91
VPS25-203ENST00000589520 CHST11Q9NPF2 352 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 ABCB10Q9NRK6 738 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 SACM1LQ9NTJ5 587 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 QPCTLQ9NXS2 382 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 LAMP5Q9UJQ1 280 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 ZNF281Q9Y2X9 895 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 HDGFL3Q9Y3E1 203 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 HS3ST3B1Q9Y662 390 aa9.38□□□□□ -0.91
VPS25-203ENST00000589520 SIRT4Q9Y6E7 314 aaPredicted RBP9.38□□□□□ -0.91
VPS25-203ENST00000589520 TRBV2A0A0J9YWF9 115 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.37□□□□□ -0.91
VPS25-203ENST00000589520 LOC102725191A0A1B0GVB3 256 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 A0A1W2PNV4 684 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 CD8B2A6NJW9 211 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 TBX1O43435 398 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 SELENOFO60613 162 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 ITGA10O75578 1167 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 STK17BO94768 372 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 DLGAP3O95886 979 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 CD8BP10966 210 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 NR2C1P13056 603 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 EDNRAP25101 427 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 NAA10P41227 235 aaPredicted RBP9.37□□□□□ -0.91
VPS25-203ENST00000589520 GDI2P50395 445 aaKnown RBP9.37□□□□□ -0.91
VPS25-203ENST00000589520 PSMD7P51665 324 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 RPS15P62841 145 aaKnown RBP9.37□□□□□ -0.91
VPS25-203ENST00000589520 IFITM3Q01628 133 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 GLO1Q04760 184 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 SCN1BQ07699 218 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 SLC3A1Q07837 685 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 CHAF1BQ13112 559 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 SELENBP1Q13228 472 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 RIN1Q13671 783 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 PLPPR5Q32ZL2 321 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 GLYR1Q49A26 553 aaPredicted RBP9.37□□□□□ -0.91
VPS25-203ENST00000589520 TP53I3Q53FA7 332 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 C1QL3Q5VWW1 255 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 CDCP2Q5VXM1 449 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 C3orf33Q6P1S2 294 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 FAM199XQ6PEV8 388 aaPredicted RBP9.37□□□□□ -0.91
VPS25-203ENST00000589520 KCTD18Q6PI47 426 aaPredicted RBP9.37□□□□□ -0.91
VPS25-203ENST00000589520 POMZP3Q6PJE2 187 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 FAM131AQ6UXB0 335 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 RAB11FIP2Q7L804 512 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 BTLAQ7Z6A9 289 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 RPS19BP1Q86WX3 136 aaKnown RBP9.37□□□□□ -0.91
VPS25-203ENST00000589520 PLCZ1Q86YW0 608 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 OR6V1Q8N148 313 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 SYT14Q8NB59 555 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 OR11G2Q8NGC1 345 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 OR10G3Q8NGC4 313 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 OR51L1Q8NGJ5 315 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 ZNF417Q8TAU3 575 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 PAQR8Q8TEZ7 354 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 ABTB1Q969K4 478 aaPredicted RBP9.37□□□□□ -0.91
VPS25-203ENST00000589520 UBL7Q96S82 380 aaPredicted RBP9.37□□□□□ -0.91
VPS25-203ENST00000589520 ZNF587Q96SQ5 575 aaPredicted RBP9.37□□□□□ -0.91
VPS25-203ENST00000589520 ATF6BQ99941 703 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 GPR87Q9BY21 358 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 ZCCHC4Q9H5U6 513 aa9.37□□□□□ -0.91
VPS25-203ENST00000589520 AKIRIN1Q9H9L7 192 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms