RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 DBPQ10586 325 aaPredicted RBP9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 MELKQ14680 651 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 SF3B4Q15427 424 aaKnown RBP eCLIP9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 TRIP10Q15642 601 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 ACKR1Q16570 336 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 SLC36A3Q495N2 470 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 ALG10Q5BKT4 473 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 PHYHD1Q5SRE7 291 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 ACSM5Q6NUN0 579 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 ZNF474Q6S9Z5 364 aaPredicted RBP9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 FAM214BQ7L5A3 538 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 HIST3H2AQ7L7L0 130 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 LINGO2Q7L985 606 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 P4HA3Q7Z4N8 544 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 CDK20Q8IZL9 346 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 ATG16L2Q8NAA4 619 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 ANKK1Q8NFD2 765 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 FANK1Q8TC84 345 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 ASB10Q8WXI3 467 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 HIST1H2ACQ93077 130 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 OR2M2Q96R28 347 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 MBOAT4Q96T53 435 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 EMC6Q9BV81 110 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 KATNB1Q9BVA0 655 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 MRPL13Q9BYD1 178 aaKnown RBP9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 PRRG4Q9BZD6 226 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 PLSCR4Q9NRQ2 329 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 INIPQ9NRY2 104 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 GLRX2Q9NS18 164 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 PTTG2Q9NZH5 202 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 FOXD3Q9UJU5 478 aaPredicted RBP9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 ZNF346Q9UL40 294 aaKnown RBP9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 NOX1Q9Y5S8 564 aa9.45□□□□□ -0.9
NPIPB3-210ENST00000542817 CENPEQ02224 2701 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 IGKV1D-43A0A0B4J1Z2 117 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 SLC35F4A4IF30 521 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 RNF13O43567 381 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 IL18BPO95998 194 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 IL2RAP01589 272 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 APEHP13798 732 aaKnown RBP9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 ZNF43P17038 809 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 GSTM3P21266 225 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 GTF2E2P29084 291 aaKnown RBP9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 ARHGDIAP52565 204 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 CASP6P55212 293 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 FOXG1P55316 489 aaPredicted RBP9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 CLDN17P56750 224 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 CTXN1P60606 82 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 EFNB1P98172 346 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 CDK5Q00535 292 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 HIST3H3Q16695 136 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 MESTQ5EB52 335 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 CLEC12AQ5QGZ9 265 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 EEF1A1P5Q5VTE0 462 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 TMEM211Q6ICI0 200 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 OR2A2Q6IF42 318 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 TFAP2EQ6VUC0 442 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 DPY19L2P2Q6ZN68 376 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 ZBTB49Q6ZSB9 765 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 PTCHD4Q6ZW05 846 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 SLC35D2Q76EJ3 337 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 GALNT5Q7Z7M9 940 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 UEVLDQ8IX04 471 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 IQCF1Q8N6M8 205 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 OR6K3Q8NGY3 331 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 OR6X1Q8NH79 312 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 ITLN2Q8WWU7 325 aaPredicted RBP9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 RND1Q92730 232 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 HDAC2Q92769 488 aaKnown RBP9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 Q96M85 177 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 ZFP3Q96NJ6 502 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 RBM4BQ9BQ04 359 aaKnown RBP9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 RBM4Q9BWF3 364 aaKnown RBP9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 SFXN3Q9BWM7 321 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 GABARAPL3Q9BY60 117 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 TXNIPQ9H3M7 391 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 KRCC1Q9NPI7 259 aaPredicted RBP9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 ZNF629Q9UEG4 869 aaPredicted RBP9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 PRSS50Q9UI38 385 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 POFUT2Q9Y2G5 429 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 TACC2O95359 2948 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 CELSR2Q9HCU4 2923 aa9.44□□□□□ -0.9
NPIPB3-210ENST00000542817 PRR14LQ5THK1 2151 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 HSPB2A8KAH6 182 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 GPR171O14626 319 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 ARPC3O15145 178 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 DENRO43583 198 aaKnown RBP9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 ZG16O60844 167 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 UPK3AO75631 287 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 SERPINI2O75830 405 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 OR6A2O95222 327 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 PPP1R3DO95685 299 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 SNAP29O95721 258 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 PGA4P0DJD7 388 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 PGA3P0DJD8 388 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 CD8BP10966 210 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 IGFBP5P24593 272 aa9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 CDKN2AP42771 156 aaKnown RBP9.43□□□□□ -0.9
NPIPB3-210ENST00000542817 OR3A2P47893 321 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms