RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 RTTNQ86VV8 2226 aa16.9■□□□□ 0.3
CCHCR1-230ENST00000513222 HTR3EA5X5Y0 456 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 RNF223E7ERA6 249 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 OR5F1O95221 314 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 MT-ND1P03886 318 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 PTNP21246 168 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 RAB35Q15286 201 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 HIST3H3Q16695 136 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 CARM1Q86X55 608 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 PROX1Q92786 737 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 TMEM54Q969K7 222 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 ZNF442Q9H7R0 627 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 B3GAT2Q9NPZ5 323 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 ZNF224Q9NZL3 707 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 FBXO9Q9UK97 447 aaPredicted RBP16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 USP22Q9UPT9 525 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 SH3GLB1Q9Y371 365 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 PMF1-BGLAPU3KQ54 211 aa16.89■□□□□ 0.29
CCHCR1-230ENST00000513222 ZNF726A6NNF4 738 aa16.88■□□□□ 0.29
CCHCR1-230ENST00000513222 CENPBD1B2RD01 187 aa16.88■□□□□ 0.29
CCHCR1-230ENST00000513222 F12P00748 615 aaPredicted RBP16.88■□□□□ 0.29
CCHCR1-230ENST00000513222 ADORA3P0DMS8 318 aa16.88■□□□□ 0.29
CCHCR1-230ENST00000513222 CALCRP30988 508 aa16.88■□□□□ 0.29
CCHCR1-230ENST00000513222 SERPINF1P36955 418 aa16.88■□□□□ 0.29
CCHCR1-230ENST00000513222 EFNA4P52798 201 aa16.88■□□□□ 0.29
CCHCR1-230ENST00000513222 HGFACQ04756 655 aa16.88■□□□□ 0.29
CCHCR1-230ENST00000513222 HSP90B2PQ58FF3 399 aa16.88■□□□□ 0.29
CCHCR1-230ENST00000513222 ARPINQ7Z6K5 226 aa16.88■□□□□ 0.29
CCHCR1-230ENST00000513222 LRRC17Q8N6Y2 441 aa16.88■□□□□ 0.29
CCHCR1-230ENST00000513222 VANGL1Q8TAA9 524 aaPredicted RBP16.88■□□□□ 0.29
CCHCR1-230ENST00000513222 NPIPB13A6NJU9 1138 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 B9A039 149 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 NPIPB4C9JG80 1138 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 M0R3G1 203 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 SSX4O60224 188 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 CCDC22O60826 627 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 CH25HO95992 272 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 IFNGR1P15260 489 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 ZNF133P52736 654 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 SELENOWP63302 87 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 TUBA1BP68363 451 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 TUBA4AP68366 448 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 CAMK2DQ13557 499 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 ADIPOQQ15848 244 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 NRN1LQ496H8 165 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 CYBRD1Q53TN4 286 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 LRFN4Q6PJG9 635 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 TUBA1AQ71U36 451 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 SLC35D2Q76EJ3 337 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 PIWIL3Q7Z3Z3 882 aaKnown RBP16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 MYPOPQ86VE0 399 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 SLC15A3Q8IY34 581 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 MICU2Q8IYU8 434 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 C10orf53Q8N6V4 93 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 OR2T12Q8NG77 320 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 SLC25A44Q96H78 314 aaPredicted RBP16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 RHNO1Q9BSD3 238 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 MRPL13Q9BYD1 178 aaKnown RBP16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 PLK3Q9H4B4 646 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 SEC61A2Q9H9S3 476 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 CMTM6Q9NX76 183 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 RIMS3Q9UJD0 308 aa16.87■□□□□ 0.29
CCHCR1-230ENST00000513222 IGHV2OR16-5A0A0B4J2B6 119 aa16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 ELOVL7A1L3X0 281 aa16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 CELA3BP08861 270 aa16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 CSF3P09919 207 aa16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 ZNF14P17017 642 aaPredicted RBP16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 AHCYP23526 432 aa16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 NUDT6P53370 316 aa16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 BIDP55957 195 aa16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 LOXL1Q08397 574 aaPredicted RBP16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 HACD2Q6Y1H2 254 aa16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 MDP1Q86V88 176 aa16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 NKAIN4Q8IVV8 208 aa16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 HOPXQ9BPY8 73 aaPredicted RBP16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 GLTPQ9NZD2 209 aa16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 ARMCX1Q9P291 453 aa16.86■□□□□ 0.29
CCHCR1-230ENST00000513222 IGHV4-30-2A0A087WSY4 118 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 MGRN1O60291 552 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 OR6A2O95222 327 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 PGA4P0DJD7 388 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 PGA3P0DJD8 388 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 ZNF35P13682 527 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 IL1RL1Q01638 556 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 PIN1Q13526 163 aaPredicted RBP16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 C10orf105Q8TEF2 133 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 RCN3Q96D15 328 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 FOXB1Q99853 325 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 KCNS3Q9BQ31 491 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 ULBP2Q9BZM5 246 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 FBXL3Q9UKT7 428 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 A4GNTQ9UNA3 340 aa16.85■□□□□ 0.29
CCHCR1-230ENST00000513222 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.84■□□□□ 0.292e-10■■■■■ 35.1
CCHCR1-230ENST00000513222 TMEM129A0AVI4 362 aa16.84■□□□□ 0.29
CCHCR1-230ENST00000513222 TLX2O43763 284 aaPredicted RBP16.84■□□□□ 0.29
CCHCR1-230ENST00000513222 HIST1H2ABP04908 130 aa16.84■□□□□ 0.29
CCHCR1-230ENST00000513222 COX4I1P13073 169 aa16.84■□□□□ 0.29
CCHCR1-230ENST00000513222 SLC25A16P16260 332 aa16.84■□□□□ 0.29
CCHCR1-230ENST00000513222 TNFRSF1BP20333 461 aa16.84■□□□□ 0.29
CCHCR1-230ENST00000513222 CSNK1A1P48729 337 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms