RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ADARB1P78563 741 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 OTUD4Q01804 1114 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 BST1Q10588 318 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 CDH17Q12864 832 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 IL24Q13007 206 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 PDIA2Q13087 525 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 AQP6Q13520 282 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 CUL2Q13617 745 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 KLF5Q13887 457 aaPredicted RBP3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 CHD4Q14839 1912 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 EMC2Q15006 297 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 ATP6AP1Q15904 470 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 CLLU1Q5K131 121 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 RIPPLY2Q5TAB7 128 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 LGSNQ5TDP6 509 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 LIPJQ5W064 366 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 LEMD1Q68G75 181 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 KDM4DQ6B0I6 523 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 RHBDD2Q6NTF9 364 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 REG3GQ6UW15 175 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 FAM159AQ6UWV7 190 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 HACD2Q6Y1H2 254 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 CYS1Q717R9 158 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 UTS2BQ765I0 119 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 GDPD3Q7L5L3 318 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 PKD1L3Q7Z443 1732 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 BNIPLQ7Z465 357 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 LUZP2Q86TE4 346 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 YRDCQ86U90 279 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 RIMS1Q86UR5 1692 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 BBS7Q8IWZ6 715 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 CLEC4FQ8N1N0 589 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 ZNF786Q8N393 782 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 EIF4E3Q8N5X7 224 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 LRRC17Q8N6Y2 441 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 TOPAZ1Q8N9V7 1692 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 OR52H1Q8NGJ2 320 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 OR52K2Q8NGK3 314 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 OR1K1Q8NGR3 316 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 OR10T2Q8NGX3 314 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 ZNF671Q8TAW3 534 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 ZFP90Q8TF47 636 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 KCTD4Q8WVF5 259 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 TMEM37Q8WXS4 190 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 GTF2H4Q92759 462 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 RAD51AP1Q96B01 352 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 TMEM45BQ96B21 275 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 LRRC39Q96DD0 335 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 C9orf72Q96LT7 481 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 RILPQ96NA2 401 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 FOXN4Q96NZ1 517 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 RGPD5Q99666 1765 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 MTG1Q9BT17 334 aaPredicted RBP3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 SLIRPQ9GZT3 109 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 CXXC4Q9H2H0 198 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 DSN1Q9H410 356 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 ZNF385DQ9H6B1 395 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 SMYD3Q9H7B4 428 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 COG4Q9H9E3 785 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 SLC17A7Q9P2U7 560 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 RAB23Q9ULC3 237 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 SPATA2Q9UM82 520 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 DLEC1Q9Y238 1755 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 GINS2Q9Y248 185 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 NDUFAF1Q9Y375 327 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 TOGARAM1Q9Y4F4 1720 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 SMAD5-AS1Q9Y6J3 95 aa3.06□□□□□ -1.92
ECHDC1-217ENST00000488087 ZNFX1Q9P2E3 1918 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 BCORQ6W2J9 1755 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 COL2A1P02458 1487 aaPredicted RBP3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 PLIN4Q96Q06 1357 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 IGSF9BQ9UPX0 1349 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 HEATR9A2RTY3 570 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 METTL15A6NJ78 407 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 ARGFXA6NJG6 315 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 CLDN24A6NM45 220 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 KRBOX1C9JBD0 128 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 GOLGA8SH3BPF8 625 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 WRBO00258 174 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 PDXKO00764 312 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 COPEO14579 308 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 SH2D1BO14796 132 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 PSTPIP1O43586 416 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 SLC22A5O76082 557 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 SLITRK3O94933 977 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 CHRNA1P02708 482 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 FTH1P02794 183 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 IFNA4P05014 189 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 SERPINE1P05121 402 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 IL6P05231 212 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 PROS1P07225 676 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 ASNSP08243 561 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 IQCF3P0C7M6 154 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 RRASP10301 218 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 PSKH1P11801 424 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 HSD17B1P14061 328 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 FOLR2P14207 255 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 GP9P14770 177 aa3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 HOXB8P17481 243 aaPredicted RBP3.05□□□□□ -1.92
ECHDC1-217ENST00000488087 XRCC1P18887 633 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms