RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 WRAP73Q9P2S5 460 aaPredicted RBP4.37□□□□□ -1.71
R3HDM1-216ENST00000483065 B4GALT7Q9UBV7 327 aa4.37□□□□□ -1.71
R3HDM1-216ENST00000483065 LSM7Q9UK45 103 aaKnown RBP4.37□□□□□ -1.71
R3HDM1-216ENST00000483065 ICAM5Q9UMF0 924 aa4.37□□□□□ -1.71
R3HDM1-216ENST00000483065 TESMINQ9Y4I5 508 aa4.37□□□□□ -1.71
R3HDM1-216ENST00000483065 GLYATL1P3A0A0U1RQE8 302 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 ANKRD20A5PA0PJZ0 165 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 HACD1B0YJ81 288 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 B4DXG7 233 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 K7ERI5 159 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 CCL21O00585 134 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 HSD17B6O14756 317 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 SLC31A1O15431 190 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 TNFSF12O43508 249 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 RGS14O43566 566 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 PRKYO43930 277 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 ALOX12BO75342 701 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 PSIP1O75475 530 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 OAS1P00973 400 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 TIMP1P01033 207 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 IGHV4-39P01824 125 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 TNNC2P02585 160 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 TACSTD2P09758 323 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 H2AFZP0C0S5 128 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 CALM1P0DP23 149 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 CALM2P0DP24 149 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 CALM3P0DP25 149 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 LIFP15018 202 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 RAB4AP20338 218 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 SLC2A5P22732 501 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 PRKAR2BP31323 418 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 ID1P41134 155 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 IDH2P48735 452 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 HLCSP50747 726 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 PSMD7P51665 324 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 PRKXP51817 358 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 EFNA3P52797 238 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 DLX5P56178 289 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 KRTAP10-2P60368 255 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 STXBP1P61764 594 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 RPS15AP62244 130 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 SLC10A2Q12908 348 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 PDIA2Q13087 525 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 MADCAM1Q13477 382 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 TAB1Q15750 504 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 TMEM249Q2WGJ8 235 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 BSXQ3C1V8 233 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 UNC50Q53HI1 259 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 ZNF425Q6IV72 752 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 FAM45BPQ6NSW5 357 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 RHBDF2Q6PJF5 856 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 USP50Q70EL3 339 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 AHSA2Q719I0 299 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 ZNF677Q86XU0 584 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 PGAM4Q8N0Y7 254 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 Q8N402 240 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 TMEM251Q8N6I4 163 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 ZNF383Q8NA42 475 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 LFNGQ8NES3 379 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 SEMA6DQ8NFY4 1073 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 OR9Q2Q8NGE9 314 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 OR6Q1Q8NGQ2 317 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 OR51A7Q8NH64 312 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 FAM45AQ8TCE6 357 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 ZPLD1Q8TCW7 415 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 DOK4Q8TEW6 326 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 TRUB1Q8WWH5 349 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 DNAJA3Q96EY1 480 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 NOL4LQ96MY1 436 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 ALKBH3Q96Q83 286 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 CYP2S1Q96SQ9 504 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 TMEM59Q9BXS4 323 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 DHX35Q9H5Z1 703 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 WDR55Q9H6Y2 383 aaPredicted RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 SIAEQ9HAT2 523 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 HRASLSQ9HDD0 168 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 MRPL40Q9NQ50 206 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 PLEKHJ1Q9NW61 149 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 SDHAF2Q9NX18 166 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 THUMPD1Q9NXG2 353 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 ELOVL5Q9NYP7 299 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 TAS2R9Q9NYW1 312 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 PPP1R3CQ9UQK1 317 aa4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 RCL1Q9Y2P8 373 aaKnown RBP4.36□□□□□ -1.71
R3HDM1-216ENST00000483065 FNDC1Q4ZHG4 1894 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 IGLV5-37A0A075B6J1 123 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 A0A1B0GTH9 108 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 A0A1B0GUS0 222 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 BCLAF3A2AJT9 711 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 LINC01553A4QN01 128 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 PRR23AA6NEV1 266 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 H3BNH8 94 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 B4GALT5O43286 388 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 RBMXL2O75526 392 aaKnown RBP4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 TRAPPC6AO75865 159 aa4.35□□□□□ -1.71
R3HDM1-216ENST00000483065 HIST1H1CP16403 213 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms