RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 MDS2Q8NDY4 140 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 OR51G1Q8NGK1 321 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 TUBGCP3Q96CW5 907 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 C12orf42Q96LP6 360 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 SH3GL1Q99961 368 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 ZFP14Q9HCL3 533 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 ETNK2Q9NVF9 386 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 KLHL28Q9NXS3 571 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 SLC2A8Q9NY64 477 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 SPATA7Q9P0W8 599 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 XCL2Q9UBD3 114 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 RABL2AQ9UBK7 228 aaPredicted RBP3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 SLC7A8Q9UHI5 535 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 TP53TG5Q9Y2B4 290 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 HEBP2Q9Y5Z4 205 aa3.03□□□□□ -1.92
SMNDC1-205ENST00000477763 TRBV6-6A0A0A6YYG2 114 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 H3BNH8 94 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 PES1O00541 588 aaKnown RBP3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 PEX7O00628 323 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 XKRYO14609 159 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 TMEM50AO95807 157 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 SLC25A27O95847 323 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 GAPDHP04406 335 aaKnown RBP3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 GKN3PP0CG01 181 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 KITLGP21583 273 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 CASQ1P31415 396 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 NPBWR2P48146 333 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 LHX2P50458 406 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 KCNJ2P63252 427 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 PPIL2Q13356 520 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 TMED1Q13445 227 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 PPP1R7Q15435 360 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 IGFL2Q6UWQ7 119 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 ZNF621Q6ZSS3 439 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 TMEM135Q86UB9 458 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 THOC6Q86W42 341 aaKnown RBP3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 SLC22A9Q8IVM8 553 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 ARIH2OSQ8N7S6 290 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 CEP112Q8N8E3 955 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 ZNF557Q8N988 423 aaPredicted RBP3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 SDR9C7Q8NEX9 313 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 OR2L3Q8NG85 312 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 DTX3LQ8TDB6 740 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 SLC2A14Q8TDB8 520 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 LINC00167Q96N53 147 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 PLIN2Q99541 437 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 TMEM59Q9BXS4 323 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 METTL7AQ9H8H3 244 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 ZNF331Q9NQX6 463 aaPredicted RBP3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 PCYOX1Q9UHG3 505 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 PACSIN2Q9UNF0 486 aaPredicted RBP3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 TRAPPC4Q9Y296 219 aa3.02□□□□□ -1.93
SMNDC1-205ENST00000477763 MSH6P52701 1360 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 KIR2DL5BA0A0G2JN68 375 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 KIR2DL5BA0A0G2JPC4 375 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 A0A1W2PPV9 198 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 XKRY2A2RUG3 117 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 UBXN8O00124 270 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 CIB2O75838 187 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 C1orf105O95561 183 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 PCCAP05165 728 aaPredicted RBP3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 SERPIND1P05546 499 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 CSF3P09919 207 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 TOP1P11387 765 aaKnown RBP3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 TNNI1P19237 187 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 NMUP48645 174 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 SUB1P53999 127 aaKnown RBP eCLIP3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 FZD2Q14332 565 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 TGFBIQ15582 683 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 PIGGQ5H8A4 983 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 LCN12Q6JVE5 192 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 KIR2DL5AQ8N109 375 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 ZADH2Q8N4Q0 377 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 KIR2DL5BQ8NHK3 375 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 AKR7LQ8NHP1 331 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 SDR42E1Q8WUS8 393 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 RNF185Q96GF1 192 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 SDHCQ99643 169 aaPredicted RBP3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 SLC25A39Q9BZJ4 359 aaPredicted RBP3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 ZNF226Q9NYT6 803 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 STOX2Q9P2F5 926 aaPredicted RBP3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 DEC1Q9P2X7 70 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 NUP50Q9UKX7 468 aa3.01□□□□□ -1.93
SMNDC1-205ENST00000477763 CCDC169A6NNP5 214 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 DLGAP1O14490 977 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 TROVE2P10155 538 aaKnown RBP eCLIP3□□□□□ -1.93
SMNDC1-205ENST00000477763 ADRB3P13945 408 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 CHMLP26374 656 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 TFPI2P48307 235 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 PLP1P60201 277 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 MRPS22P82650 360 aaKnown RBP3□□□□□ -1.93
SMNDC1-205ENST00000477763 MECOMQ03112 1051 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 SMARCB1Q12824 385 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 AQP6Q13520 282 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 ZBED5Q49AG3 693 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 TMEM107Q6UX40 140 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 SLC25A48Q6ZT89 311 aaKnown RBP3□□□□□ -1.93
SMNDC1-205ENST00000477763 Q6ZVH6 145 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 LHFPL3Q86UP9 236 aa3□□□□□ -1.93
SMNDC1-205ENST00000477763 PUSL1Q8N0Z8 303 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms