RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 NOX3Q9HBY0 568 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 DYNLRB1Q9NP97 96 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 ARFGEF3Q5TH69 2177 aa18.21■□□□□ 0.51
VSX1-206ENST00000444511 SH3PXD2BA1X283 911 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 M0QX08 132 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 PLPP3O14495 311 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 MT-ATP6P00846 226 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 MTPNP58546 118 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 DUSP7Q16829 419 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 KRT80Q6KB66 452 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 PXKQ7Z7A4 578 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 OR5J2Q8NH18 312 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 NEU4Q8WWR8 484 aaPredicted RBP18.2■□□□□ 0.5
VSX1-206ENST00000444511 CGREF1Q99674 301 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 DOK1Q99704 481 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 ARHGDIGQ99819 225 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 BPESC1Q9GZL8 116 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 CHODLQ9H9P2 273 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 B3GNT2Q9NY97 397 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 TRIM33Q9UPN9 1127 aa18.2■□□□□ 0.5
VSX1-206ENST00000444511 CPSF4LA6NMK7 179 aaKnown RBP18.19■□□□□ 0.5
VSX1-206ENST00000444511 PHF1O43189 567 aaPredicted RBP18.19■□□□□ 0.5
VSX1-206ENST00000444511 CHP2O43745 196 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 OR6A2O95222 327 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 C8BP07358 591 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 ADORA3P0DMS8 318 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 DAOP14920 347 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 B4GALT1P15291 398 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 PIGFQ07326 219 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 NHLRC1Q6VVB1 395 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 PHC2Q8IXK0 858 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 DPP10Q8N608 796 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 ARIH2OSQ8N7S6 290 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 CKAP2Q8WWK9 683 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 STON2Q8WXE9 905 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 MSI2Q96DH6 328 aaKnown RBP18.19■□□□□ 0.5
VSX1-206ENST00000444511 CMAHPQ9Y471 501 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 RTTNQ86VV8 2226 aa18.19■□□□□ 0.5
VSX1-206ENST00000444511 C11orf98E9PRG8 122 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 STAMBPO95630 424 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 ZNF23P17027 643 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 IGFBP5P24593 272 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 CSNK1A1P48729 337 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 NFYCQ13952 458 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 SELPLGQ14242 412 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 ENTPD8Q5MY95 495 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 ZNF627Q7L945 461 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 RETREG3Q86VR2 466 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 WDFY1Q8IWB7 410 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 SLC30A8Q8IWU4 369 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 CDK20Q8IZL9 346 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 ZCCHC24Q8N2G6 241 aaKnown RBP18.18■□□□□ 0.5
VSX1-206ENST00000444511 GPR32P1Q8NGA4 272 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 OR6T1Q8NGN1 323 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 MS4A3Q96HJ5 214 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 MAGEB18Q96M61 343 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 FOXB1Q99853 325 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 SPEF1Q9Y4P9 236 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 CUBNO60494 3623 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 MXRA5Q9NR99 2828 aa18.18■□□□□ 0.5
VSX1-206ENST00000444511 TMEM129A0AVI4 362 aa18.17■□□□□ 0.5
VSX1-206ENST00000444511 HMGB1P1B2RPK0 211 aaPredicted RBP18.17■□□□□ 0.5
VSX1-206ENST00000444511 RAB36O95755 333 aa18.17■□□□□ 0.5
VSX1-206ENST00000444511 IFNGR1P15260 489 aa18.17■□□□□ 0.5
VSX1-206ENST00000444511 NR4A1P22736 598 aa18.17■□□□□ 0.5
VSX1-206ENST00000444511 PTDSS1P48651 473 aaKnown RBP18.17■□□□□ 0.5
VSX1-206ENST00000444511 BIDP55957 195 aa18.17■□□□□ 0.5
VSX1-206ENST00000444511 NPTX1Q15818 432 aa18.17■□□□□ 0.5
VSX1-206ENST00000444511 TRMT5Q32P41 509 aaKnown RBP18.17■□□□□ 0.5
VSX1-206ENST00000444511 TTC33Q6PID6 262 aaPredicted RBP18.17■□□□□ 0.5
VSX1-206ENST00000444511 LINC00114Q6XXX2 140 aa18.17■□□□□ 0.5
VSX1-206ENST00000444511 PATL1Q86TB9 770 aaKnown RBP18.17■□□□□ 0.5
VSX1-206ENST00000444511 VANGL1Q8TAA9 524 aaPredicted RBP18.17■□□□□ 0.5
VSX1-206ENST00000444511 SLC26A7Q8TE54 656 aa18.17■□□□□ 0.5
VSX1-206ENST00000444511 ZNF385DQ9H6B1 395 aa18.17■□□□□ 0.5
VSX1-206ENST00000444511 FBN3Q75N90 2809 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 CH25HO95992 272 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 TGFAP01135 160 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 ADRA2AP08913 450 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 ZNF14P17017 642 aaPredicted RBP18.16■□□□□ 0.5
VSX1-206ENST00000444511 SRD5A1P18405 259 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 HNF1AP20823 631 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 GIFP27352 417 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 GIPRP48546 466 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 RAB1AP62820 205 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 ZNF74Q16587 644 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 FAM120AOSQ5T036 256 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 RBM45Q8IUH3 476 aaKnown RBP18.16■□□□□ 0.5
VSX1-206ENST00000444511 ADAMTS16Q8TE57 1224 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 TSPEARQ8WU66 669 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 DENND2DQ9H6A0 471 aaPredicted RBP18.16■□□□□ 0.5
VSX1-206ENST00000444511 KAT8Q9H7Z6 458 aaKnown RBP18.16■□□□□ 0.5
VSX1-206ENST00000444511 NPHS2Q9NP85 383 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 SLC7A7Q9UM01 511 aa18.16■□□□□ 0.5
VSX1-206ENST00000444511 YLPM1P49750 1951 aaKnown RBP18.15■□□□□ 0.5
VSX1-206ENST00000444511 TRAPPC13A5PLN9 417 aa18.15■□□□□ 0.5
VSX1-206ENST00000444511 KPNA4O00629 521 aaPredicted RBP18.15■□□□□ 0.5
VSX1-206ENST00000444511 UBL3O95164 117 aa18.15■□□□□ 0.5
VSX1-206ENST00000444511 PCGF2P35227 344 aa18.15■□□□□ 0.5
VSX1-206ENST00000444511 GALK2Q01415 458 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms