RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	TMEM19	Q96HH6	336 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	LURAP1	Q96LR2	239 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	KCTD14	Q9BQ13	255 aa	Predicted RBP	5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ANGPTL4	Q9BY76	406 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	KRTAP9-9	Q9BYP9	154 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	KRTAP9-4	Q9BYQ2	154 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	POTEKP	Q9BYX7	375 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ZNF350	Q9GZX5	532 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	IKZF5	Q9H5V7	419 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	TMEM38A	Q9H6F2	299 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	KAT8	Q9H7Z6	458 aa	Known RBP	5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	MTHFD2L	Q9H903	347 aa	Predicted RBP	5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	AGPAT4	Q9NRZ5	378 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	PPP4R1L	Q9P1A2	415 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	MKLN1	Q9UL63	735 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	ABCG2	Q9UNQ0	655 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	DIMT1	Q9UNQ2	313 aa	Known RBP	5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CSAG2	Q9Y5P2	127 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	GMPPB	Q9Y5P6	360 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	CFAP54	Q96N23	3096 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	FRYL	O94915	3013 aa		5.59	□□□□□ -1.51
ECHDC1-208	ENST00000436638	FAM230A	A0A1W2PPH8	454 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638		A0A1W2PQD3	144 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SMIM30	A4D0T7	59 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PRORSD1P	A6NEY8	169 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SERINC4	A6NH21	518 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	AQP12B	A6NM10	295 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	C22orf46	C9J442	243 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NPIPA2	E9PIF3	369 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZNF701	M0R085	212 aa	Predicted RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	FXYD1	O00168	92 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	TFEC	O14948	347 aa	Predicted RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SLC22A1	O15245	554 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	TLX2	O43763	284 aa	Predicted RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	KIAA0513	O60268	411 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	FADS1	O60427	444 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	FCMR	O60667	390 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CCNK	O75909	580 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ANGPTL1	O95841	491 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NUDT14	O95848	222 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SERPINA3	P01011	423 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	C1QC	P02747	245 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	KRT8	P05787	483 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	DBI	P07108	87 aa	Known RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	YES1	P07947	543 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NGFR	P08138	427 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CHRM4	P08173	479 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	GUSB	P08236	651 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	OR8G3P	P0DMU2	310 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CALCB	P10092	127 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	UQCRB	P14927	111 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CPT2	P23786	658 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ELAVL4	P26378	380 aa	Known RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	TACR3	P29371	465 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	APOBEC3A	P31941	199 aa	Predicted RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SLC1A3	P43003	542 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ERF	P50548	548 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CCR4	P51679	360 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	MVD	P53602	400 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	RPL11	P62913	178 aa	Known RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PPIA	P62937	165 aa	Known RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ALDH6A1	Q02252	535 aa	Known RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SLA	Q13239	276 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SMCO1	Q147U7	214 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PON3	Q15166	354 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZNF141	Q15928	474 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZSWIM7	Q19AV6	140 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	VMAC	Q2NL98	169 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	LIN52	Q52LA3	116 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	C9orf152	Q5JTZ5	239 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	PDZK1	Q5T2W1	519 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	LIPN	Q5VXI9	398 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	TYW3	Q6IPR3	259 aa	Known RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	TMEM81	Q6P7N7	255 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	FRRS1	Q6ZNA5	592 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	OLIG3	Q7RTU3	272 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NET1	Q7Z628	596 aa	Predicted RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	MARCH3	Q86UD3	253 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SLC22A16	Q86VW1	577 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	CCDC103	Q8IW40	242 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	FOXRED2	Q8IWF2	684 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ZZZ3	Q8IYH5	903 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	MICU2	Q8IYU8	434 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ENTHD1	Q8IYW4	607 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	OFCC1	Q8IZS5	231 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	ARHGAP24	Q8N264	748 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	COMMD1	Q8N668	190 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	RNF152	Q8N8N0	203 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	DTX3	Q8N9I9	347 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	GATS	Q8NAP1	163 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	RBM15B	Q8NDT2	890 aa	Known RBP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	OR4C3	Q8NH37	302 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	NDNF	Q8TB73	568 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	FNDC8	Q8TC99	324 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SLC38A5	Q8WUX1	472 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	GLMP	Q8WWB7	406 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	AKAP1	Q92667	903 aa	Known RBP eCLIP	5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	MAL2	Q969L2	176 aa		5.58	□□□□□ -1.52
ECHDC1-208	ENST00000436638	SPSB4	Q96A44	273 aa		5.58	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms