RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ZNF726A6NNF4 738 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 RNF223E7ERA6 249 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 CCDC22O60826 627 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 OR5F1O95221 314 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 OR6A2O95222 327 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 CBR1P16152 277 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 PAX7P23759 505 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 CALCRP30988 508 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 SEC24CP53992 1094 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 UGT2B15P54855 530 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 BIDP55957 195 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 TAS2R41P59536 307 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 NAAAQ02083 359 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 MST1LQ2TV78 715 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 C8orf82Q6P1X6 216 aaPredicted RBP15.39■□□□□ 0.05
LSM5-204ENST00000409909 SLC35D2Q76EJ3 337 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 MAPK1IP1LQ8NDC0 245 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 PFN4Q8NHR9 129 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 TPD52L3Q96J77 140 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 ELAC2Q9BQ52 826 aaKnown RBP15.39■□□□□ 0.05
LSM5-204ENST00000409909 B3GNT2Q9NY97 397 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 HIVEP2P31629 2446 aa15.39■□□□□ 0.05
LSM5-204ENST00000409909 NME4O00746 187 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 RNF13O43567 381 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 SSX4O60224 188 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 CRYAAP02489 173 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 MT-ND1P03886 318 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 FUT4P22083 530 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 SELENOWP63302 87 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 LIPEQ05469 1076 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 SWI5Q1ZZU3 235 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 ZNF627Q7L945 461 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 SPATA21Q7Z572 469 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 MDP1Q86V88 176 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 OR6N1Q8NGY5 312 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 OR6X1Q8NH79 312 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 TMEM54Q969K7 222 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 ADAD1Q96M93 576 aaKnown RBP15.38■□□□□ 0.05
LSM5-204ENST00000409909 REG4Q9BYZ8 158 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 POLR2J2Q9GZM3 115 aaKnown RBP15.38■□□□□ 0.05
LSM5-204ENST00000409909 POLR2J3Q9H1A7 115 aaKnown RBP15.38■□□□□ 0.05
LSM5-204ENST00000409909 BARX1Q9HBU1 254 aaPredicted RBP15.38■□□□□ 0.05
LSM5-204ENST00000409909 B3GAT2Q9NPZ5 323 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 C20orf141Q9NUB4 165 aa15.38■□□□□ 0.05
LSM5-204ENST00000409909 JMJD1CQ15652 2540 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 H7C417 338 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 HLA-HP01893 362 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 HIST1H2ABP04908 130 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 UMPSP11172 480 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 RBM34P42696 430 aaKnown RBP15.37■□□□□ 0.05
LSM5-204ENST00000409909 CSNK1A1P48729 337 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 IDH3GP51553 393 aaPredicted RBP15.37■□□□□ 0.05
LSM5-204ENST00000409909 HGFACQ04756 655 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 KRTAP1-1Q07627 177 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 ZNF813Q6ZN06 617 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 HIST3H2AQ7L7L0 130 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 ARPINQ7Z6K5 226 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 VTCN1Q7Z7D3 282 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 CCDC36Q8IYA8 594 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 TMEM239Q8WW34 195 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 HIST1H2ACQ93077 130 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 HOPXQ9BPY8 73 aaPredicted RBP15.37■□□□□ 0.05
LSM5-204ENST00000409909 KCNS3Q9BQ31 491 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 ULBP2Q9BZM5 246 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 MYLK2Q9H1R3 596 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 EFCAB1Q9HAE3 211 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 NOX3Q9HBY0 568 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 MOV10Q9HCE1 1003 aaKnown RBP15.37■□□□□ 0.05
LSM5-204ENST00000409909 CA10Q9NS85 328 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 ZNF224Q9NZL3 707 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 A4GNTQ9UNA3 340 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 POFUT2Q9Y2G5 429 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 AP3M1Q9Y2T2 418 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 SNX13Q9Y5W8 968 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 CR1P17927 2039 aa15.37■□□□□ 0.05
LSM5-204ENST00000409909 ANK3Q12955 4377 aaKnown RBP15.37■□□□□ 0.05
LSM5-204ENST00000409909 BLOC1S5-TXNDC5H3BN57 136 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 OR7A10O76100 309 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 B4GALT1P15291 398 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 FUT1P19526 365 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 ARR3P36575 388 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 CAPZA2P47755 286 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 SLC7A2P52569 658 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 RPL18Q07020 188 aaKnown RBP15.36■□□□□ 0.05
LSM5-204ENST00000409909 MELKQ14680 651 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 RAB35Q15286 201 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 LRFN4Q6PJG9 635 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 HACD2Q6Y1H2 254 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 NANOGNBQ7Z5D8 188 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 FBXO17Q96EF6 278 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 ZNF75AQ96N20 296 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 GLTPQ9NZD2 209 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 SONP18583 2426 aaKnown RBP15.36■□□□□ 0.05
LSM5-204ENST00000409909 ABCA1O95477 2261 aa15.36■□□□□ 0.05
LSM5-204ENST00000409909 IGHV2OR16-5A0A0B4J2B6 119 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 CXCR6O00574 342 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 IGF2P01344 180 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 F13BP05160 661 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 THRBP10828 461 aa15.35■□□□□ 0.05
LSM5-204ENST00000409909 SERPINF1P36955 418 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms