RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 ENTPD5O75356 428 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 IGKV3-15P01624 115 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 IGLV1-44P01699 117 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 CD79AP11912 226 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 IFNGR1P15260 489 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 MDH1P40925 334 aaKnown RBP11.96□□□□□ -0.49
CXCL12-205ENST00000395794 IDH3GP51553 393 aaPredicted RBP11.96□□□□□ -0.49
CXCL12-205ENST00000395794 EFNA4P52798 201 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 BIDP55957 195 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 NPRL3Q12980 569 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 LRRC23Q53EV4 343 aaPredicted RBP11.96□□□□□ -0.49
CXCL12-205ENST00000395794 VHLLQ6RSH7 139 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 WDR88Q6ZMY6 472 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 ZNF813Q6ZN06 617 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 DEF8Q6ZN54 512 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 SLC35D2Q76EJ3 337 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 SLC46A3Q7Z3Q1 461 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 NANOGNBQ7Z5D8 188 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 ARPINQ7Z6K5 226 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 MAPK1IP1LQ8NDC0 245 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 RP9Q8TA86 221 aaKnown RBP11.96□□□□□ -0.49
CXCL12-205ENST00000395794 LZICQ8WZA0 190 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 ZNF837Q96EG3 531 aaPredicted RBP11.96□□□□□ -0.49
CXCL12-205ENST00000395794 ZNF583Q96ND8 569 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 NELFAQ9H3P2 528 aa11.96□□□□□ -0.49
CXCL12-205ENST00000395794 FBXO9Q9UK97 447 aaPredicted RBP11.96□□□□□ -0.49
CXCL12-205ENST00000395794 USF3Q68DE3 2245 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 ELOVL7A1L3X0 281 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 FAM220BPB1ANY3 271 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 B9A039 149 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 BLOC1S5-TXNDC5H3BN57 136 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 SEC14L2O76054 403 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 OR5F1O95221 314 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 ERCC1P07992 297 aaPredicted RBP11.95□□□□□ -0.5
CXCL12-205ENST00000395794 CSF3P09919 207 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 KDELR2P33947 212 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 RBM34P42696 430 aaKnown RBP11.95□□□□□ -0.5
CXCL12-205ENST00000395794 ZP4Q12836 540 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 GSG1Q2KHT4 349 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 CYBRD1Q53TN4 286 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 PHYHD1Q5SRE7 291 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 DNM1P46Q6ZS02 220 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 MDP1Q86V88 176 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 OR6X1Q8NH79 312 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 FAM168AQ92567 244 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 HTRA1Q92743 480 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 ZNF566Q969W8 418 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 RCN3Q96D15 328 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 TPD52L3Q96J77 140 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 ARMCX1Q9P291 453 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 RIMS3Q9UJD0 308 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 SPEF1Q9Y4P9 236 aa11.95□□□□□ -0.5
CXCL12-205ENST00000395794 A0A1W2PRG6 482 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 INAFM1C9JVW0 142 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 PDE5AO76074 875 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 LYPD3O95274 346 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 RAB36O95755 333 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 BCL10O95999 233 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 F12P00748 615 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-205ENST00000395794 HLA-HP01893 362 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 MT-ND1P03886 318 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 THY1P04216 161 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 OR4A8P0C604 315 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 THRBP10828 461 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 B4GALT1P15291 398 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 TNFRSF1BP20333 461 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 OR1E2P47887 323 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 CRYBA2P53672 197 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 SWI5Q1ZZU3 235 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 NHLRC1Q6VVB1 395 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 HDDC2Q7Z4H3 204 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 MICU2Q8IYU8 434 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 LRRC17Q8N6Y2 441 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 POU5F2Q8N7G0 328 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 NUP37Q8NFH4 326 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 TMEM239Q8WW34 195 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 SGTBQ96EQ0 304 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 SLC25A44Q96H78 314 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-205ENST00000395794 FOXB1Q99853 325 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 VRK1Q99986 396 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-205ENST00000395794 ZNF426Q9BUY5 554 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 DENND2DQ9H6A0 471 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-205ENST00000395794 TAS2R5Q9NYW4 299 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 GLTPQ9NZD2 209 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 FBXL3Q9UKT7 428 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 MED31Q9Y3C7 131 aa11.94□□□□□ -0.5
CXCL12-205ENST00000395794 IGHV4-30-2A0A087WSY4 118 aa11.93□□□□□ -0.5
CXCL12-205ENST00000395794 MCIDASD6RGH6 385 aa11.93□□□□□ -0.5
CXCL12-205ENST00000395794 NDUFAB1O14561 156 aa11.93□□□□□ -0.5
CXCL12-205ENST00000395794 GSTA4O15217 222 aa11.93□□□□□ -0.5
CXCL12-205ENST00000395794 SHOX2O60902 331 aaPredicted RBP11.93□□□□□ -0.5
CXCL12-205ENST00000395794 UBL3O95164 117 aa11.93□□□□□ -0.5
CXCL12-205ENST00000395794 FARS2O95363 451 aaKnown RBP11.93□□□□□ -0.5
CXCL12-205ENST00000395794 IGHG1P01857 330 aa11.93□□□□□ -0.5
CXCL12-205ENST00000395794 CELA3BP08861 270 aa11.93□□□□□ -0.5
CXCL12-205ENST00000395794 ASAH2BP0C7U1 165 aa11.93□□□□□ -0.5
CXCL12-205ENST00000395794 COX4I1P13073 169 aa11.93□□□□□ -0.5
CXCL12-205ENST00000395794 SLC25A16P16260 332 aa11.93□□□□□ -0.5
CXCL12-205ENST00000395794 FUT1P19526 365 aa11.93□□□□□ -0.5
CXCL12-205ENST00000395794 NPR2P20594 1047 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms