RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 DNASE1L1P49184 302 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 DSCR4P56555 118 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-202ENST00000324340 B2MP61769 119 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 BTG1P62324 171 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 RPS4XP62701 263 aaKnown RBP11.51□□□□□ -0.57
DDX39A-202ENST00000324340 RUNX1T1Q06455 604 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 FOXF1Q12946 379 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 RIN1Q13671 783 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 ZNF74Q16587 644 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 TMEM44Q2T9K0 475 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 GLYR1Q49A26 553 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-202ENST00000324340 SPINK14Q6IE38 97 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 LINC00696Q6ZRV3 163 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 LSRQ86X29 649 aaPredicted RBP11.51□□□□□ -0.57
DDX39A-202ENST00000324340 ENTHD1Q8IYW4 607 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 GHDCQ8N2G8 530 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 YIPF7Q8N8F6 280 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 OR8D4Q8NGM9 314 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 OR6S1Q8NH40 331 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 TEX47Q8TBZ9 253 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 APH1BQ8WW43 257 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 NEDD4LQ96PU5 975 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 DCLRE1CQ96SD1 692 aaKnown RBP11.51□□□□□ -0.57
DDX39A-202ENST00000324340 NPAS1Q99742 590 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 CHRNA9Q9UGM1 479 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 NUFIP1Q9UHK0 495 aaKnown RBP11.51□□□□□ -0.57
DDX39A-202ENST00000324340 ATPIF1Q9UII2 106 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 VDAC3Q9Y277 283 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 MRPS18CQ9Y3D5 142 aaKnown RBP11.51□□□□□ -0.57
DDX39A-202ENST00000324340 CMAHPQ9Y471 501 aa11.51□□□□□ -0.57
DDX39A-202ENST00000324340 TRAV36DV7A0A075B6V5 113 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 A0A0G2JMM0 328 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 A0A1W2PPB8 328 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 A0A1W2PRS3 328 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 LRRC3CA6NJW4 275 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 KIR3DP1A8MWS1 328 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 G3V3Y1 287 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 FZD7O75084 574 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 RCBTB2O95199 551 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 TSPAN19P0C672 248 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 ASAH2BP0C7U1 165 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 SAGP10523 405 aaPredicted RBP11.5□□□□□ -0.57
DDX39A-202ENST00000324340 GABRB1P18505 474 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 FUT1P19526 365 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 FKBP2P26885 142 aaKnown RBP11.5□□□□□ -0.57
DDX39A-202ENST00000324340 POU1F1P28069 291 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 UQCRC1P31930 480 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 SMSP52788 366 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 CDC42P60953 191 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 FOXO1Q12778 655 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 GINS1Q14691 196 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 DEFB109BQ30KR1 87 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 CLLU1Q5K131 121 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 LCN1P1Q5VSP4 162 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 SLC27A4Q6P1M0 643 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 OAFQ86UD1 273 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 GTPBP8Q8N3Z3 284 aaPredicted RBP11.5□□□□□ -0.57
DDX39A-202ENST00000324340 FDCSPQ8NFU4 85 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 OR13C2Q8NGS9 318 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 GGHQ92820 318 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 KTI12Q96EK9 354 aaPredicted RBP11.5□□□□□ -0.57
DDX39A-202ENST00000324340 GNRHR2Q96P88 292 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 FAM173AQ9BQD7 235 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 PTDSS2Q9BVG9 487 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 TAPBPLQ9BX59 468 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 OR52D1Q9H346 318 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 UBQLN3Q9H347 655 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 PLA2G3Q9NZ20 509 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 ZNF337Q9Y3M9 751 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 PCDHGB7Q9Y5F8 929 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 FKBP7Q9Y680 259 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 MED13Q9UHV7 2174 aa11.5□□□□□ -0.57
DDX39A-202ENST00000324340 A0A1W2PQ09 198 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 ZC3H12DA2A288 527 aaKnown RBP11.49□□□□□ -0.57
DDX39A-202ENST00000324340 EFNA2O43921 213 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 SSX4O60224 188 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 NME2P1O60361 137 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 ZIC3O60481 467 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 CH25HO95992 272 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 F10P00742 488 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 MT-ATP6P00846 226 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 IL1AP01583 271 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 BGLAPP02818 100 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 ZNF17P17021 662 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 NME2P22392 152 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 CFL1P23528 166 aaKnown RBP11.49□□□□□ -0.57
DDX39A-202ENST00000324340 DPP4P27487 766 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 SRD5A2P31213 254 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 EIF2S3P41091 472 aaKnown RBP11.49□□□□□ -0.57
DDX39A-202ENST00000324340 ID4P47928 161 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 CCL11P51671 97 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 EFNB1P98172 346 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 LTBQ06643 244 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 MRPL28Q13084 256 aaKnown RBP11.49□□□□□ -0.57
DDX39A-202ENST00000324340 HSD17B12Q53GQ0 312 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 C1orf140Q5VVS0 124 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 SMARCD3Q6STE5 483 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 PLET1Q6UQ28 207 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 PM20D2Q8IYS1 436 aa11.49□□□□□ -0.57
DDX39A-202ENST00000324340 OR2M7Q8NG81 312 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms