RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 URGCP-MRPS24S4R325 110 aa14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 MKI67P46013 3256 aaKnown RBP14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 MGMTP16455 207 aa14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 DMKNQ6E0U4 476 aaPredicted RBP14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 TMEM150AQ86TG1 271 aa14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 GAREM1Q9H706 876 aa14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 RAG2P55895 527 aa14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 PDGFRLQ15198 375 aa14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 SPICQ8N5J4 248 aa14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 OR51A4Q8NGJ6 313 aa14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 CA5BP1Q8WTZ4 195 aa14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 MKKSQ9NPJ1 570 aaPredicted RBP14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 MRPS18AQ9NVS2 196 aaKnown RBP14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 PLXND1Q9Y4D7 1925 aa14.59□□□□□ -0.07
PRPF40B-201ENST00000261897 A0A087WV62 115 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 ANKRD20A5PA0PJZ0 165 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 METTL12A8MUP2 240 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 MCIDASD6RGH6 385 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 DBIP07108 87 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 C8AP07357 584 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 BCL6P41182 706 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 DNASE1L1P49184 302 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 DEFA6Q01524 100 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 MORN1Q5T089 497 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 RGCCQ9H4X1 137 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 CENPMQ9NSP4 180 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 A0A0D9SG52 128 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 NDUFA2O43678 99 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 THY1P04216 161 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 CSF1P09603 554 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 SMAD2Q15796 467 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 LDLRAD1Q5T700 205 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 STPG1Q5TH74 334 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 ARHGAP11AQ6P4F7 1023 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 FAM199XQ6PEV8 388 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 ZNF600Q6ZNG1 722 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 LRRC25Q8N386 305 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 LYSMD1Q96S90 227 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 SULT4A1Q9BR01 284 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 SLC46A2Q9BY10 475 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 ELL3Q9HB65 397 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 MED12Q93074 2177 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 hCG_1809904A0A1W2PP81 198 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 A0A1W2PR64 198 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 A0A1W2PRV1 198 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 HTR3BO95264 441 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 GP1BAP07359 652 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 CTSLP07711 333 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 SPARCP09486 303 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 PSMA3P25788 255 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 RFC3P40938 356 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 HAAOP46952 286 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 PPIAP62937 165 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 CSNK1G2P78368 415 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 NTHL1P78549 312 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 HTRA4P83105 476 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 C21orf62-AS1Q17RA5 79 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 SLC25A30Q5SVS4 291 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 MCATQ8IVS2 390 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 SETD7Q8WTS6 366 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 FOXRED1Q96CU9 486 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 AHCYL2Q96HN2 611 aaKnown RBP14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 AKR1E2Q96JD6 320 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 CASD1Q96PB1 797 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 ACKR4Q9NPB9 350 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 PCYT1BQ9Y5K3 369 aaPredicted RBP14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 CSAG2Q9Y5P2 127 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 SLC22A7Q9Y694 548 aa14.58□□□□□ -0.08
PRPF40B-201ENST00000261897 C5orf42Q9H799 3197 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 A0A1B0GWA3 101 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 SNRPGP15A8MWD9 76 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 SLC31A1O15431 190 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 TACSTD2P09758 323 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 ZNF888P0CJ79 500 aaPredicted RBP14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 RAB2AP61019 212 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 CTAG1AP78358 180 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 OR52W1Q6IF63 320 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 SLC29A4Q7RTT9 530 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 PPP1R14AQ96A00 147 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 STARD5Q9NSY2 213 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 TDRD15B5MCY1 1934 aaKnown RBP14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 SLC33A1O00400 549 aaPredicted RBP14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 ICOSLGO75144 302 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 NFATC1O95644 943 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 ARG1P05089 322 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 HOXB5P09067 269 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 RAB40ALP0C0E4 278 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 ADRB3P13945 408 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 GRK6P43250 576 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 RPS10P46783 165 aaKnown RBP14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 PABPC1L2AQ5JQF8 200 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 LCTLQ6UWM7 567 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 NAXDQ8IW45 347 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 OR4K14Q8NGD5 310 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 ZPLD1Q8TCW7 415 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 C2orf15Q8WU43 125 aaKnown RBP14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 LCN9Q8WX39 176 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 RAB40AQ8WXH6 277 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 GAL3ST3Q96A11 431 aa14.57□□□□□ -0.08
PRPF40B-201ENST00000261897 GSN-AS1Q9NRJ2 163 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms