RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 GABARAPO95166 117 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 SCGB1D1O95968 90 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 CST5P28325 142 aaPredicted RBP10.67□□□□□ -0.7
LAMA4-201ENST00000230538 SRPXP78539 464 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 ILKQ13418 452 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 STEAP3Q658P3 488 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 MRPL38Q96DV4 380 aaKnown RBP10.67□□□□□ -0.7
LAMA4-201ENST00000230538 ZNF583Q96ND8 569 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 PSD2Q9BQI7 771 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 F10P00742 488 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 EIF4EP06730 217 aaKnown RBP10.67□□□□□ -0.7
LAMA4-201ENST00000230538 NAGAP17050 411 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 POLR2IP36954 125 aaKnown RBP10.67□□□□□ -0.7
LAMA4-201ENST00000230538 NHSL2Q5HYW2 709 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 TMEM64Q6YI46 380 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 LINC00696Q6ZRV3 163 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 NAA40Q86UY6 237 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 KLHDC9Q8NEP7 349 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 FER1L6-AS2Q96M78 137 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 ETV7Q9Y603 341 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 LAMA4Q16363 1823 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 A8MVM7 634 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 NSA2O95478 260 aaKnown RBP10.67□□□□□ -0.7
LAMA4-201ENST00000230538 HBE1P02100 147 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 ERVFC1P60507 584 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 OPCMLQ14982 345 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 ZFPM2Q8WW38 1151 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 NKX6-3A6NJ46 265 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 EIF1BO60739 113 aaKnown RBP10.67□□□□□ -0.7
LAMA4-201ENST00000230538 M6PRP20645 277 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 PPT1P50897 306 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 GAREM2Q75VX8 874 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 MARCH3Q86UD3 253 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 FJX1Q86VR8 437 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 PLPP5Q8NEB5 264 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 H1FXQ92522 213 aaKnown RBP10.67□□□□□ -0.7
LAMA4-201ENST00000230538 FGGYQ96C11 551 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 HSD17B6O14756 317 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 PHF1O43189 567 aaPredicted RBP10.67□□□□□ -0.7
LAMA4-201ENST00000230538 NXPH3O95157 252 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 SLC35E2P0CK97 266 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 NME2P22392 152 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 NPBWR1P48145 328 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 CRMP1Q14194 572 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 ATOH1Q92858 354 aaPredicted RBP10.67□□□□□ -0.7
LAMA4-201ENST00000230538 NIPSNAP1Q9BPW8 284 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 SLC39A9Q9NUM3 307 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 MMACHCQ9Y4U1 282 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 SNX11Q9Y5W9 270 aa10.67□□□□□ -0.7
LAMA4-201ENST00000230538 IMPA2O14732 288 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 BCL6P41182 706 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 RUNX2Q13950 521 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 CTRCQ99895 268 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 ABHD6Q9BV23 337 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 GFOD1Q9NXC2 390 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 NPAP1Q9NZP6 1156 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 MTHFD2P13995 350 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 ZNF93P35789 620 aaPredicted RBP10.66□□□□□ -0.7
LAMA4-201ENST00000230538 TM4SF4P48230 202 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 TGM4P49221 684 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 BTN1A1Q13410 526 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 PAPD4Q6PIY7 484 aaKnown RBP10.66□□□□□ -0.7
LAMA4-201ENST00000230538 FAM109AQ8N4B1 249 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 CLDN22Q8N7P3 220 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 CELF2-AS1Q8N7Q2 184 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 GAB3Q8WWW8 586 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 LINC01599Q8WXQ3 324 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 SUCNR1Q9BXA5 334 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 TM7SF3Q9NS93 570 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 B3GAT1Q9P2W7 334 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 MYO10Q9HD67 2058 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 HLA-DOBP13765 273 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 EIF1P41567 113 aaKnown RBP10.66□□□□□ -0.7
LAMA4-201ENST00000230538 HNF4GQ14541 408 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 HMGN3Q15651 99 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 STEAP1BQ6NZ63 245 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 SLC48A1Q6P1K1 146 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 NANPQ8TBE9 248 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 PCNPQ8WW12 178 aaKnown RBP10.66□□□□□ -0.7
LAMA4-201ENST00000230538 MS4A4AQ96JQ5 239 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 HRASLS5Q96KN8 279 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 AMBRA1Q9C0C7 1298 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 PTTG3PQ9NZH4 202 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 KLK4Q9Y5K2 254 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 UBL3O95164 117 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 PAPLNO95428 1278 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 CT45A6P0DMU7 189 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 CT45A5P0DMU8 189 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 CT45A7P0DMV0 189 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 CT45A8P0DMV1 189 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 CT45A9P0DMV2 189 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 FOLR1P15328 257 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 AADACP22760 399 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 CT45A2Q5DJT8 189 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 CT45A1Q5HYN5 189 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 CT45A3Q8NHU0 189 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 NECAP2Q9NVZ3 263 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 LOC100289279A0A1B0GTE1 492 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 hCG_1809904A0A1W2PP81 198 aa10.66□□□□□ -0.7
LAMA4-201ENST00000230538 A0A1W2PPE2 198 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms