RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 CXorf56Q9H5V9 222 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 FKRPQ9H9S5 495 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 GPR35Q9HC97 309 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 MGAT4BQ9UQ53 548 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 MAGED1Q9Y5V3 778 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 SETD2Q9BYW2 2564 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 SLC35F4A4IF30 521 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 E7EQL1 145 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 ASAH2BP0C7U1 165 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 ADORA3P0DMS8 318 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 AHCYP23526 432 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 PRDX6P30041 224 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 GSK3BP49841 420 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 CDH11P55287 796 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 TAS2R41P59536 307 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 GNGT1P63211 74 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 ZP4Q12836 540 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 ANKRD16Q6P6B7 361 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 SLC46A3Q7Z3Q1 461 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 PIGWQ7Z7B1 504 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 VTCN1Q7Z7D3 282 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 GPR137CQ8N3F9 429 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 PIK3C3Q8NEB9 887 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 TMEM255BQ8WV15 326 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 LRR1Q96L50 414 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 NSRP1Q9H0G5 558 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 ALG2Q9H553 416 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 CRLF2Q9HC73 371 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 OBP2BQ9NPH6 170 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 NANSQ9NR45 359 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 ABCD2Q9UBJ2 740 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 ZNF229Q9UJW7 825 aa16.15■□□□□ 0.18
SHKBP1-202ENST00000593764 A0A096LPE4 126 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 ARPC4-TTLL3A0A0A6YYG9 625 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 A0A1W2PPZ6 126 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 C11orf98E9PRG8 122 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 CXCR6O00574 342 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 AKAP8O43823 692 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 WNT11O96014 354 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 MT-ND1P03886 318 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 FUT4P22083 530 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 RBM34P42696 430 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 UGT2B15P54855 530 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 SH3BGRP55822 239 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 PSME3P61289 254 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 RPS4XP62701 263 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 ARF1P84077 181 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 CEACAM16Q2WEN9 425 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 CARD17Q5XLA6 110 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 SLC22A25Q6T423 547 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 B3GLCTQ6Y288 498 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 YTHDF3Q7Z739 585 aaKnown RBP16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 DTX2Q86UW9 622 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 PFN4Q8NHR9 129 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 A4GNTQ9UNA3 340 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 SNX13Q9Y5W8 968 aa16.14■□□□□ 0.17
SHKBP1-202ENST00000593764 M0R3G1 203 aa16.13■□□□□ 0.17
SHKBP1-202ENST00000593764 THRBP10828 461 aa16.13■□□□□ 0.17
SHKBP1-202ENST00000593764 HOXB1P14653 301 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-202ENST00000593764 IFNGR1P15260 489 aa16.13■□□□□ 0.17
SHKBP1-202ENST00000593764 FOSL1P15407 271 aa16.13■□□□□ 0.17
SHKBP1-202ENST00000593764 CAMK2DQ13557 499 aa16.13■□□□□ 0.17
SHKBP1-202ENST00000593764 KLHL24Q6TFL4 600 aa16.13■□□□□ 0.17
SHKBP1-202ENST00000593764 TMEM239Q8WW34 195 aa16.13■□□□□ 0.17
SHKBP1-202ENST00000593764 TRAF4Q9BUZ4 470 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-202ENST00000593764 GRIP2Q9C0E4 1043 aa16.13■□□□□ 0.17
SHKBP1-202ENST00000593764 C20orf141Q9NUB4 165 aa16.13■□□□□ 0.17
SHKBP1-202ENST00000593764 CRNNQ9UBG3 495 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-202ENST00000593764 IGHV1-18A0A0C4DH31 117 aa16.12■□□□□ 0.17
SHKBP1-202ENST00000593764 SERPINI2O75830 405 aa16.12■□□□□ 0.17
SHKBP1-202ENST00000593764 IGF2P01344 180 aa16.12■□□□□ 0.17
SHKBP1-202ENST00000593764 UBE2NP61088 152 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-202ENST00000593764 TUBA1BP68363 451 aa16.12■□□□□ 0.17
SHKBP1-202ENST00000593764 TUBA4AP68366 448 aa16.12■□□□□ 0.17
SHKBP1-202ENST00000593764 LSM11P83369 360 aaKnown RBP eCLIP16.12■□□□□ 0.17
SHKBP1-202ENST00000593764 TUBA1AQ71U36 451 aa16.12■□□□□ 0.17
SHKBP1-202ENST00000593764 CBLL1Q75N03 491 aa16.12■□□□□ 0.17
SHKBP1-202ENST00000593764 SLC35D2Q76EJ3 337 aa16.12■□□□□ 0.17
SHKBP1-202ENST00000593764 LZICQ8WZA0 190 aa16.12■□□□□ 0.17
SHKBP1-202ENST00000593764 Q96MF0 132 aa16.12■□□□□ 0.17
SHKBP1-202ENST00000593764 HS6ST2Q96MM7 605 aa16.12■□□□□ 0.17
SHKBP1-202ENST00000593764 ZNF503-AS2A6NEH8 195 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 ZNF726A6NNF4 738 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 ZNF99A8MXY4 864 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 J3KTA2 159 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 NDUFAB1O14561 156 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 FFAR1O14842 300 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 GSTA4O15217 222 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 RNF13O43567 381 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 OR7A10O76100 309 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 OR6A2O95222 327 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 IGLV1-44P01699 117 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 HIST1H2ABP04908 130 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 TSPAN19P0C672 248 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 NCK1P16333 377 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 FUT1P19526 365 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 TTKP33981 857 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 CDKN1AP38936 164 aa16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 YAP1P46937 504 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-202ENST00000593764 BIDP55957 195 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 228.2 ms