RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 SQLEQ14534 574 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 GLIPR1L2Q4G1C9 344 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 GKAP1Q5VSY0 366 aaPredicted RBP11.85□□□□□ -0.51
HDAC5-208ENST00000588419 ZNF813Q6ZN06 617 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 H1FNTQ75WM6 255 aaPredicted RBP11.85□□□□□ -0.51
HDAC5-208ENST00000588419 COMTD1Q86VU5 262 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 OR6N1Q8NGY5 312 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 UBASH3BQ8TF42 649 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 SYT3Q9BQG1 590 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 ASPNQ9BXN1 380 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 B3GAT2Q9NPZ5 323 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 KLHL14Q9P2G3 628 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 FZR1Q9UM11 496 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 POFUT2Q9Y2G5 429 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 CMAHPQ9Y471 501 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 NOX1Q9Y5S8 564 aa11.85□□□□□ -0.51
HDAC5-208ENST00000588419 SVEP1Q4LDE5 3571 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 POLR3GO15318 223 aaPredicted RBP11.84□□□□□ -0.51
HDAC5-208ENST00000588419 HPRP00739 348 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 C8BP07358 591 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 ARAFP10398 606 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 AHCYP23526 432 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 PRKAR1BP31321 381 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 AQP5P55064 265 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 CDK6Q00534 326 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 CAMK2DQ13557 499 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 GSG1Q2KHT4 349 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 LIPNQ5VXI9 398 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 C5orf46Q6UWT4 87 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 C6orf89Q6UWU4 347 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 KRT73Q86Y46 540 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 TMEM123Q8N131 208 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 LINC01356Q8N9X3 169 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 DOK1Q99704 481 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 SPATA5L1Q9BVQ7 753 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 ULBP2Q9BZM5 246 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 TMEM27Q9HBJ8 222 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 LPAR2Q9HBW0 351 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 BCL2L10Q9HD36 194 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.84□□□□□ -0.51
HDAC5-208ENST00000588419 TESQ9UGI8 421 aaKnown RBP11.84□□□□□ -0.51
HDAC5-208ENST00000588419 FBXO9Q9UK97 447 aaPredicted RBP11.84□□□□□ -0.51
HDAC5-208ENST00000588419 USH1CQ9Y6N9 552 aa11.84□□□□□ -0.51
HDAC5-208ENST00000588419 A0A087WUJ7 227 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 TMEM129A0AVI4 362 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 ZNF726A6NNF4 738 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 LRRN3E7EW58 273 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 C11orf98E9PRG8 122 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 M0R233 179 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 TPST1O60507 370 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 RAB36O95755 333 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 ETS2P15036 469 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 ALDH3B1P43353 468 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 GALK2Q01415 458 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 PMS2P3Q13401 168 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 SCARB2Q14108 478 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 MAD2L1BPQ15013 274 aaPredicted RBP11.83□□□□□ -0.52
HDAC5-208ENST00000588419 OR1Q1Q15612 314 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 TRMT5Q32P41 509 aaKnown RBP11.83□□□□□ -0.52
HDAC5-208ENST00000588419 ALKBH6Q3KRA9 238 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 REEP3Q6NUK4 255 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 C10orf111Q8N326 155 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 FAM169BQ8N8A8 192 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 DNAJA4Q8WW22 397 aaPredicted RBP11.83□□□□□ -0.52
HDAC5-208ENST00000588419 SLC35B4Q969S0 331 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 SLC47A1Q96FL8 570 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 C1orf159Q96HA4 380 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 TXNDC15Q96J42 360 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 EPYCQ99645 322 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 MRPL37Q9BZE1 423 aaKnown RBP11.83□□□□□ -0.52
HDAC5-208ENST00000588419 C12orf10Q9HB07 376 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 SLC25A37Q9NYZ2 338 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 CCDC167Q9P0B6 97 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 SLAMF8Q9P0V8 285 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 TMEFF2Q9UIK5 374 aaPredicted RBP11.83□□□□□ -0.52
HDAC5-208ENST00000588419 PRDM4Q9UKN5 801 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 RAB21Q9UL25 225 aa11.83□□□□□ -0.52
HDAC5-208ENST00000588419 A0A1W2PPW3 197 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 MS4A18H0YCH9 400 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 TCF21O43680 179 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 LILRA1O75019 489 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 BGLAPP02818 100 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 BMP2P12643 396 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 ITGA2P17301 1181 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 GIFP27352 417 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 THBS2P35442 1172 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 PUDPQ08623 228 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 MFSD13AQ14CX5 517 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 MSMPQ1L6U9 139 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 MS4A18Q3C1V0 323 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 ULK3Q6PHR2 472 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 DHRS4L2Q6PKH6 230 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 NET1Q7Z628 596 aaPredicted RBP11.82□□□□□ -0.52
HDAC5-208ENST00000588419 RANBP3LQ86VV4 465 aaPredicted RBP11.82□□□□□ -0.52
HDAC5-208ENST00000588419 WDFY1Q8IWB7 410 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 MSRB3Q8IXL7 192 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 C20orf196Q8IYI0 205 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 ZNF786Q8N393 782 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 LSMEM1Q8N8F7 131 aa11.82□□□□□ -0.52
HDAC5-208ENST00000588419 ANKK1Q8NFD2 765 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms