RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 ANKRD27Q96NW4 1050 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 OR2M2Q96R28 347 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 OR52B2Q96RD2 323 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 SYT3Q9BQG1 590 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 RSPO3Q9BXY4 272 aaPredicted RBP5.54□□□□□ -1.52
SDF2-205ENST00000587629 PARD6BQ9BYG5 372 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 LINC00470Q9BZP3 86 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 ARMC7Q9H6L4 198 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 RMND5AQ9H871 391 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 LPAR2Q9HBW0 351 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 NOX3Q9HBY0 568 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 MYOZ1Q9NP98 299 aaPredicted RBP5.54□□□□□ -1.52
SDF2-205ENST00000587629 B3GAT1Q9P2W7 334 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 IFT52Q9Y366 437 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 CMAHPQ9Y471 501 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 PCDHB14Q9Y5E9 798 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 ARFGEF3Q5TH69 2177 aa5.54□□□□□ -1.52
SDF2-205ENST00000587629 IGKV1D-42A0A075B6H8 117 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 A0A1B0GWA3 101 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 TMEM120BA0PK00 339 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 ZNF99A8MXY4 864 aaPredicted RBP5.53□□□□□ -1.52
SDF2-205ENST00000587629 LRRN3E7EW58 273 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 MS4A18H0YCH9 400 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 RPL36A-HNRNPH2H7BZ11 118 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 CLIC1O00299 241 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 AIM2O14862 343 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 UBDO15205 165 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 TPST1O60507 370 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 SNNO75324 88 aaPredicted RBP5.53□□□□□ -1.52
SDF2-205ENST00000587629 TACSTD2P09758 323 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 PATE4P0C8F1 98 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 ZCCHC18P0CG32 403 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 B4GALT1P15291 398 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 NR4A1P22736 598 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 COL8A2P25067 703 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 HTR2AP28223 471 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 ALDH3B1P43353 468 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 PTDSS1P48651 473 aaKnown RBP5.53□□□□□ -1.52
SDF2-205ENST00000587629 GSK3AP49840 483 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 SEC24CP53992 1094 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 RIN1Q13671 783 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 MAD2L1BPQ15013 274 aaPredicted RBP5.53□□□□□ -1.52
SDF2-205ENST00000587629 RGNQ15493 299 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 MSMPQ1L6U9 139 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 GSG1Q2KHT4 349 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 MS4A18Q3C1V0 323 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 C3orf36Q3SXR2 165 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 ALG10BQ5I7T1 473 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 GKAP1Q5VSY0 366 aaPredicted RBP5.53□□□□□ -1.52
SDF2-205ENST00000587629 H1FNTQ75WM6 255 aaPredicted RBP5.53□□□□□ -1.52
SDF2-205ENST00000587629 MAVSQ7Z434 540 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 LRP11Q86VZ4 500 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 UEVLDQ8IX04 471 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 KIRREL3Q8IZU9 778 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 TMEM123Q8N131 208 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 MIER2Q8N344 545 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 ZNF786Q8N393 782 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 MREGQ8N565 214 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.53□□□□□ -1.52
SDF2-205ENST00000587629 FAM169BQ8N8A8 192 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 PIK3C3Q8NEB9 887 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 NFKBIDQ8NI38 313 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 GTF2H4Q92759 462 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 SLC38A4Q969I6 547 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 MRPL37Q9BZE1 423 aaKnown RBP5.53□□□□□ -1.52
SDF2-205ENST00000587629 PAIP1Q9H074 479 aaKnown RBP5.53□□□□□ -1.52
SDF2-205ENST00000587629 ZNF442Q9H7R0 627 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 A4GALTQ9NPC4 353 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 SDR39U1Q9NRG7 319 aaPredicted RBP5.53□□□□□ -1.52
SDF2-205ENST00000587629 THAP1Q9NVV9 213 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 MED29Q9NX70 200 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 REV1Q9UBZ9 1251 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 USP22Q9UPT9 525 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 RCE1Q9Y256 329 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 POFUT2Q9Y2G5 429 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 NOX1Q9Y5S8 564 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 ANK2Q01484 3957 aa5.53□□□□□ -1.52
SDF2-205ENST00000587629 TRAV36DV7A0A075B6V5 113 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 A0A087WUJ7 227 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 ZNF726A6NNF4 738 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 C11orf98E9PRG8 122 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 M0R233 179 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 WNT9BO14905 357 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 TRAF3IP2O43734 574 aaPredicted RBP5.52□□□□□ -1.53
SDF2-205ENST00000587629 SYNGR3O43761 229 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 OR2T1O43869 369 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 ZNF500O60304 480 aaPredicted RBP5.52□□□□□ -1.53
SDF2-205ENST00000587629 VENTXO95231 258 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 HPXP02790 462 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 NAT2P11245 290 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 AHCYP23526 432 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 PAX7P23759 505 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 AQP1P29972 269 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 GIPRP48546 466 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 CDH15P55291 814 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 RAB1AP62820 205 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 POU3F1Q03052 451 aaPredicted RBP5.52□□□□□ -1.53
SDF2-205ENST00000587629 PMS2P3Q13401 168 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 CAMK2DQ13557 499 aa5.52□□□□□ -1.53
SDF2-205ENST00000587629 RAB39AQ14964 217 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms