RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 SLCO5A1Q9H2Y9 848 aa11.13□□□□□ -0.63
RETREG3-203ENST00000585894 PARPBPQ9NWS1 579 aa11.13□□□□□ -0.63
RETREG3-203ENST00000585894 UPB1Q9UBR1 384 aa11.13□□□□□ -0.63
RETREG3-203ENST00000585894 MALT1Q9UDY8 824 aa11.13□□□□□ -0.63
RETREG3-203ENST00000585894 NOX1Q9Y5S8 564 aa11.13□□□□□ -0.63
RETREG3-203ENST00000585894 U3KQV3 271 aa11.13□□□□□ -0.63
RETREG3-203ENST00000585894 ABCA4P78363 2273 aa11.13□□□□□ -0.63
RETREG3-203ENST00000585894 LRBAP50851 2863 aa11.13□□□□□ -0.63
RETREG3-203ENST00000585894 POLQO75417 2590 aa11.13□□□□□ -0.63
RETREG3-203ENST00000585894 LOC102725191A0A1B0GVB3 256 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 TCRBV3S1A0A5B6 114 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 SLC35F4A4IF30 521 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 HNRNPRO43390 633 aaKnown RBP11.12□□□□□ -0.63
RETREG3-203ENST00000585894 RAD51DO75771 328 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 ITGA5P08648 1049 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 RAP2AP10114 183 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 ZNF26P17031 533 aaPredicted RBP11.12□□□□□ -0.63
RETREG3-203ENST00000585894 CDH2P19022 906 aaPredicted RBP11.12□□□□□ -0.63
RETREG3-203ENST00000585894 OMPP47874 163 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 BIDP55957 195 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 SFRP5Q5T4F7 317 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 C1orf146Q5VVC0 180 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 SLC35D2Q76EJ3 337 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 PXKQ7Z7A4 578 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 RNF113BQ8IZP6 322 aaKnown RBP11.12□□□□□ -0.63
RETREG3-203ENST00000585894 LIPHQ8WWY8 451 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 KISS1RQ969F8 398 aaPredicted RBP11.12□□□□□ -0.63
RETREG3-203ENST00000585894 SLCO4A1Q96BD0 722 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 TNFRSF13CQ96RJ3 184 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 ZNF347Q96SE7 839 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 MED18Q9BUE0 208 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 ASB6Q9NWX5 421 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 LYVE1Q9Y5Y7 322 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 A0A1W2PR80 420 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 CLOCKO15516 846 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 IGF2P01344 180 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 THBDP07204 575 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 PSMB1P20618 241 aaKnown RBP11.12□□□□□ -0.63
RETREG3-203ENST00000585894 COX5AP20674 150 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 IL32P24001 234 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 LIMS1P48059 325 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 IST1P53990 364 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 RPS4XP62701 263 aaKnown RBP11.12□□□□□ -0.63
RETREG3-203ENST00000585894 ZP4Q12836 540 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 ITGADQ13349 1161 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 TOP3AQ13472 1001 aaPredicted RBP11.12□□□□□ -0.63
RETREG3-203ENST00000585894 CAMK2DQ13557 499 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 CCNIQ14094 377 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 TMPRSS11FQ6ZWK6 438 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 BHLHA15Q7RTS1 189 aaPredicted RBP11.12□□□□□ -0.63
RETREG3-203ENST00000585894 ZER1Q7Z7L7 766 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 TMEM123Q8N131 208 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 ZNF433Q8N7K0 673 aaPredicted RBP11.12□□□□□ -0.63
RETREG3-203ENST00000585894 OR9Q2Q8NGE9 314 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 OR4C15Q8NGM1 316 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 ZNF837Q96EG3 531 aaPredicted RBP11.12□□□□□ -0.63
RETREG3-203ENST00000585894 MCCC2Q9HCC0 563 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 RCE1Q9Y256 329 aa11.12□□□□□ -0.63
RETREG3-203ENST00000585894 M0R3G1 203 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 PDLIM1O00151 329 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 TNFRSF11BO00300 401 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 OR10H3O60404 316 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 SLC43A1O75387 559 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 KRT33AO76009 404 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 TSPAN19P0C672 248 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 SMIM11AP58511 58 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 RUNX1T1Q06455 604 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 P2RY6Q15077 328 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 STK11Q15831 433 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 OR2T5Q6IEZ7 315 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 OAFQ86UD1 273 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 CDK20Q8IZL9 346 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 LRRC75AQ8NAA5 344 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 ANKK1Q8NFD2 765 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 OR2T29Q8NH02 315 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 RSRC1Q96IZ7 334 aaKnown RBP11.11□□□□□ -0.63
RETREG3-203ENST00000585894 FANCFQ9NPI8 374 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 INIPQ9NRY2 104 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 IL20RAQ9UHF4 553 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 HIF3AQ9Y2N7 669 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 GPR52Q9Y2T5 361 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 SAMHD1Q9Y3Z3 626 aaKnown RBP11.11□□□□□ -0.63
RETREG3-203ENST00000585894 AKAP6Q13023 2319 aa11.11□□□□□ -0.63
RETREG3-203ENST00000585894 CIB4A0PJX0 185 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 MCIDASD6RGH6 385 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 SIAH2O43255 324 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 KLF4O43474 513 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 FKBP6O75344 327 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 SEC14L2O76054 403 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 CST1P01037 141 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 EPXP11678 715 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 FXYD6P3P58550 94 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 KRTAP10-9P60411 292 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 ROR2Q01974 943 aaKnown RBP11.1□□□□□ -0.63
RETREG3-203ENST00000585894 ACKR1Q16570 336 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 ALG10Q5BKT4 473 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 TMEM179BQ7Z7N9 219 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 WFDC8Q8IUA0 241 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 POMGNT2Q8NAT1 580 aa11.1□□□□□ -0.63
RETREG3-203ENST00000585894 FAM222BQ8WU58 562 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms