RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 TMPRSS9Q7Z410 1059 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 OR4N5Q8IXE1 308 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 CMTM4Q8IZR5 234 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 SLC22A18ASQ8N1D0 253 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 OR2L13Q8N349 312 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 SLC16A11Q8NCK7 471 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 OR4D9Q8NGE8 314 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 OR52I2Q8NH67 350 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 LGALS14Q8TCE9 139 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 GPBAR1Q8TDU6 330 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 HMGB4Q8WW32 186 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 PATE1Q8WXA2 126 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 PHYHIPQ92561 330 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 COL26A1Q96A83 441 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 HINT3Q9NQE9 182 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 PRDM9Q9NQV7 894 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 TAS2R10Q9NYW0 307 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 PCDHGA5Q9Y5G8 931 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 SLC22A7Q9Y694 548 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 SZT2Q5T011 3432 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 BRWD1Q9NSI6 2320 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 DUXAA6NLW8 204 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 H0YGG7 62 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 ACOT7O00154 380 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 FRS3O43559 492 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 FCMRO60667 390 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 IGHV4-34P06331 123 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 PAX6P26367 422 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 HTR2AP28223 471 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 TLX1P31314 330 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 RABIFP47224 123 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 ARF3P61204 181 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 UBE2IP63279 158 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 SLC3A1Q07837 685 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 ST3GAL3Q11203 375 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 ECH1Q13011 328 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 COL9A2Q14055 689 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 RBMS2Q15434 407 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 PAN3Q58A45 887 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 C3orf33Q6P1S2 294 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF613Q6PF04 617 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF620Q6ZNG0 422 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 USP53Q70EK8 1073 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 OR5M1Q8NGP8 315 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 DIO2Q92813 273 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 CDS1Q92903 461 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 SGK3Q96BR1 496 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 MRPL48Q96GC5 212 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 ZFYVE21Q9BQ24 234 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 CMSS1Q9BQ75 279 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 TCEAL2Q9H3H9 227 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 RNF122Q9H9V4 155 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 LYRM4Q9HD34 91 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 POT1Q9NUX5 634 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 USP36Q9P275 1121 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 MRPS2Q9Y399 296 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 ENTPD2Q9Y5L3 495 aa12.77□□□□□ -0.37
RABGGTA-220ENST00000560998 KANTRA0A1W2PQU2 76 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 OR14I1A6ND48 311 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 SHISA7A6NL88 538 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 CPSF4LA6NMK7 179 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 C2orf74A8MZ97 194 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 PRAMEF26H0Y7S4 382 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 UBE2CO00762 179 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 GOSR2O14653 212 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 SIGLEC5O15389 551 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 HTR3BO95264 441 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 AGR2O95994 175 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 CRYBA1P05813 215 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 CPMP14384 443 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 PVRP15151 417 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF10P21506 573 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 SDHBP21912 280 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 KCNJ3P48549 501 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 SIGLEC14Q08ET2 396 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 CCINQ13939 588 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 OR7E24Q6IFN5 339 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 FRRS1Q6ZNA5 592 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 ESPNLQ6ZVH7 1005 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 CBLN2Q8IUK8 224 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 CPOQ8IVL8 374 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 RNF113BQ8IZP6 322 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 KCNRGQ8N5I3 272 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 TMEM99Q8N816 258 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 THAP6Q8TBB0 222 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 BAHD1Q8TBE0 780 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 FAM3CQ92520 227 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 RSC1A1Q92681 617 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 RERGQ96A58 199 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 FAM46AQ96IP4 442 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 ART5Q96L15 291 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 OR1F2PQ96R84 312 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 BCL2L14Q9BZR8 327 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 KRCC1Q9NPI7 259 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 SEMA4GQ9NTN9 838 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 MRPL15Q9P015 296 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 SCN2AQ99250 2005 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 FAM221BA6H8Z2 402 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 OR6C68A6NDL8 312 aa12.76□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF860A6NHJ4 632 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 218.7 ms