RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 DNAJA3Q96EY1 480 aa8.53□□□□□ -1.04
HNRNPC-223ENST00000556142 TMEM41AQ96HV5 264 aa8.53□□□□□ -1.04
HNRNPC-223ENST00000556142 SNX18Q96RF0 628 aa8.53□□□□□ -1.04
HNRNPC-223ENST00000556142 SLIRPQ9GZT3 109 aaKnown RBP8.53□□□□□ -1.04
HNRNPC-223ENST00000556142 WDR70Q9NW82 654 aa8.53□□□□□ -1.04
HNRNPC-223ENST00000556142 PCNX3Q9H6A9 2034 aa8.53□□□□□ -1.04
HNRNPC-223ENST00000556142 A0A087WZY1 265 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 LIPT2A6NK58 231 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 CDRT15L2A8MXV6 281 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 DCTN6O00399 190 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 LRRTM2O43300 516 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 ZIC3O60481 467 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 TRIM3O75382 744 aaPredicted RBP8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 MRPL3P09001 348 aaKnown RBP8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 CLK1P49759 484 aaKnown RBP8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 ZNF41P51814 821 aaPredicted RBP8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 BDH1Q02338 343 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 KRR1Q13601 381 aaKnown RBP8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 LIPKQ5VXJ0 399 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 SLC6A19Q695T7 634 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 CD200R1LQ6Q8B3 271 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 LINC00299Q6ZSB3 139 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 USP43Q70EL4 1123 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 SSX6Q7RTT6 188 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 MDGA2Q7Z553 956 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 TMPRSS12Q86WS5 348 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 ZNF843Q8N446 348 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 ARIH2OSQ8N7S6 290 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 SCAIQ8N9R8 606 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 ZNF417Q8TAU3 575 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 SMAP2Q8WU79 429 aaPredicted RBP8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 DDIT4LQ96D03 193 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 ZMYND19Q96E35 227 aaPredicted RBP8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 SGCZQ96LD1 299 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 ZNF587Q96SQ5 575 aaPredicted RBP8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 CHCHD6Q9BRQ6 235 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 ALG8Q9BVK2 526 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 ASPNQ9BXN1 380 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 NXF2Q9GZY0 626 aaKnown RBP8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 DCSTAMPQ9H295 470 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 TXNIPQ9H3M7 391 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 INIPQ9NRY2 104 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 HPF1Q9NWY4 346 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 BABAM2Q9NXR7 383 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 IL17BQ9UHF5 180 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 STUB1Q9UNE7 303 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 CORINQ9Y5Q5 1042 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 NOX1Q9Y5S8 564 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 SPIN1Q9Y657 262 aaPredicted RBP8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 SIRT4Q9Y6E7 314 aaPredicted RBP8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 PTPRBP23467 1997 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 APC2O95996 2303 aa8.52□□□□□ -1.04
HNRNPC-223ENST00000556142 CFAP46Q8IYW2 2715 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 ACACAQ13085 2346 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 SDK2Q58EX2 2172 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 A0A1W2PQL4 384 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 DAPL1A0PJW8 107 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 METTL15A6NJ78 407 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 STMND1H3BQB6 276 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 CLPXO76031 633 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 OR2T7P0C7T2 308 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 LIFP15018 202 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 SHC1P29353 583 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 ATP6V1E1P36543 226 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 P2RY4P51582 365 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 HCCSP53701 268 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 RPS3AP61247 264 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 RPL27P61353 136 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 RPS7P62081 194 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 RPS25P62851 125 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 TUBA1BP68363 451 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 LGALS3BPQ08380 585 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 CAMK2BQ13554 666 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 ATP1A4Q13733 1029 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 MFSD13AQ14CX5 517 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 PON3Q15166 354 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 ACKR1Q16570 336 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 ZNF239Q16600 458 aaKnown RBP8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 MOGQ16653 247 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 DGUOKQ16854 277 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 TIMM50Q3ZCQ8 353 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 ACER2Q5QJU3 275 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 LCN1P1Q5VSP4 162 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 EEF1A1P5Q5VTE0 462 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 TIGD3Q6B0B8 471 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 JMJD6Q6NYC1 403 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 TUBA1AQ71U36 451 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 H1FNTQ75WM6 255 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 JAZF1Q86VZ6 243 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 RAB43Q86YS6 212 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 WDFY1Q8IWB7 410 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 GPALPP1Q8IXQ4 340 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 OR6V1Q8N148 313 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 GTPBP8Q8N3Z3 284 aaPredicted RBP8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 TMEM156Q8N614 296 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 POMGNT2Q8NAT1 580 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 OR4K17Q8NGC6 315 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 OR51L1Q8NGJ5 315 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 OR5M1Q8NGP8 315 aa8.52□□□□□ -1.05
HNRNPC-223ENST00000556142 OR2T27Q8NH04 317 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms