RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 ZNF658Q5TYW1 1059 aaPredicted RBP3.59□□□□□ -1.83
PABPN1-204ENST00000554062 LRRC66Q68CR7 880 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 OR52E8Q6IFG1 317 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 C11orf71Q6IPW1 123 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 BAIAP2L2Q6UXY1 529 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 LRRC31Q6UY01 552 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 PPP1R27Q86WC6 154 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 PLA2G4DQ86XP0 818 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.59□□□□□ -1.83
PABPN1-204ENST00000554062 FAM81AQ8TBF8 368 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 SMIM14Q96QK8 99 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 TGS1Q96RS0 853 aaKnown RBP3.59□□□□□ -1.83
PABPN1-204ENST00000554062 HIST1H4GQ99525 98 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 KIR2DL4Q99706 377 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 UBXN6Q9BZV1 441 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 PPA2Q9H2U2 334 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 FANCIQ9NVI1 1328 aa3.59□□□□□ -1.83
PABPN1-204ENST00000554062 PXDNLA1KZ92 1463 aa3.59□□□□□ -1.84
PABPN1-204ENST00000554062 IGHV3-35A0A0C4DH35 117 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 TRBV11-1A0A0K0K1C0 115 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 OR5B21A6NL26 309 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 ZNF705EA8MWA4 302 aaPredicted RBP3.58□□□□□ -1.84
PABPN1-204ENST00000554062 LOC110117498-PIK3R3F6TDL0 507 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 KIF2AO00139 706 aaPredicted RBP3.58□□□□□ -1.84
PABPN1-204ENST00000554062 ABCD4O14678 606 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 PSTPIP1O43586 416 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 CDH16O75309 829 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 OXSR1O95747 527 aaPredicted RBP3.58□□□□□ -1.84
PABPN1-204ENST00000554062 TMEM50AO95807 157 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 ASGR1P07306 291 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 VDAC1P21796 283 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 VHLP40337 213 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 P2RY4P51582 365 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 RIPK4P57078 832 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 ERVPABLB-1P60509 514 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 TGM3Q08188 693 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 GK3PQ14409 553 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 OXA1LQ15070 435 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 ZNF77Q15935 545 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 AANATQ16613 207 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 DUSP7Q16829 419 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 DGUOKQ16854 277 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 Q1RN00 199 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 PARP15Q460N3 678 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 VPS26BQ4G0F5 336 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 ZNF530Q6P9A1 599 aaPredicted RBP3.58□□□□□ -1.84
PABPN1-204ENST00000554062 FRA10AC1Q70Z53 315 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 SMIM5Q71RC9 77 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 MOB1BQ7L9L4 216 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 C17orf82Q86X59 251 aaPredicted RBP3.58□□□□□ -1.84
PABPN1-204ENST00000554062 MARCH9Q86YJ5 346 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 APOBEC3FQ8IUX4 373 aaKnown RBP3.58□□□□□ -1.84
PABPN1-204ENST00000554062 PSTKQ8IV42 348 aaKnown RBP3.58□□□□□ -1.84
PABPN1-204ENST00000554062 MFSD6LQ8IWD5 586 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 COMMD1Q8N668 190 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 FNDC5Q8NAU1 212 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 FAM184AQ8NB25 1140 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 OR7G2Q8NG99 324 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 ARNTL2Q8WYA1 636 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 PLEKHA8Q96JA3 519 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 PAXXQ9BUH6 204 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 MFFQ9GZY8 342 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 IQCGQ9H095 443 aaKnown RBP3.58□□□□□ -1.84
PABPN1-204ENST00000554062 ZNF160Q9HCG1 818 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 PSME2Q9UL46 239 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 STARD10Q9Y365 291 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 USP42Q9H9J4 1324 aaKnown RBP3.58□□□□□ -1.84
PABPN1-204ENST00000554062 LAMB4A4D0S4 1761 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 ARFGEF2Q9Y6D5 1785 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 FER1L6Q2WGJ9 1857 aa3.58□□□□□ -1.84
PABPN1-204ENST00000554062 IGHV1OR15-1A0A075B7D0 117 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 HCRTR1O43613 425 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 PI15O43692 258 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 ERLIN2O94905 339 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 CST1P01037 141 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 FTH1P02794 183 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 MMP1P03956 469 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 FGF1P05230 155 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 SERPIND1P05546 499 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 C2P06681 752 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 FGF4P08620 206 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 PABPC4LP0CB38 370 aaKnown RBP3.57□□□□□ -1.84
PABPN1-204ENST00000554062 SLC35E2P0CK97 266 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 IGLL1P15814 213 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 PRDX3P30048 256 aaKnown RBP3.57□□□□□ -1.84
PABPN1-204ENST00000554062 RDXP35241 583 aaKnown RBP3.57□□□□□ -1.84
PABPN1-204ENST00000554062 ACLYP53396 1101 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 C21orf59P57076 290 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 ERVK-25P63136 954 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 CXCL6P80162 114 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 ZFP36L1Q07352 338 aaKnown RBP3.57□□□□□ -1.84
PABPN1-204ENST00000554062 OR5I1Q13606 314 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 TGFBIQ15582 683 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 PRR30Q53SZ7 412 aaPredicted RBP3.57□□□□□ -1.84
PABPN1-204ENST00000554062 WDR81Q562E7 1941 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 PAN3Q58A45 887 aaKnown RBP3.57□□□□□ -1.84
PABPN1-204ENST00000554062 OTUD6AQ7L8S5 288 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 SSX9Q7RTT3 188 aa3.57□□□□□ -1.84
PABPN1-204ENST00000554062 N4BP2Q86UW6 1770 aaPredicted RBP3.57□□□□□ -1.84
PABPN1-204ENST00000554062 GPR65Q8IYL9 337 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms