RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 PRKCAP17252 672 aa14.77□□□□□ -0.04
COL4A1-204ENST00000543140 EMP2P54851 167 aa14.77□□□□□ -0.04
COL4A1-204ENST00000543140 BICRALQ6AI39 1079 aa14.77□□□□□ -0.04
COL4A1-204ENST00000543140 UTS2BQ765I0 119 aa14.77□□□□□ -0.04
COL4A1-204ENST00000543140 SLC16A9Q7RTY1 509 aa14.77□□□□□ -0.04
COL4A1-204ENST00000543140 MAMDC2Q7Z304 686 aaPredicted RBP14.77□□□□□ -0.04
COL4A1-204ENST00000543140 GLCCI1Q86VQ1 547 aa14.77□□□□□ -0.04
COL4A1-204ENST00000543140 UBQLNLQ8IYU4 475 aa14.77□□□□□ -0.04
COL4A1-204ENST00000543140 DEFB123Q8N688 67 aa14.77□□□□□ -0.04
COL4A1-204ENST00000543140 TRMT10AQ8TBZ6 339 aaKnown RBP14.77□□□□□ -0.04
COL4A1-204ENST00000543140 SEMA4CQ9C0C4 833 aa14.77□□□□□ -0.04
COL4A1-204ENST00000543140 AK6Q9Y3D8 172 aaKnown RBP14.77□□□□□ -0.04
COL4A1-204ENST00000543140 B4DXG7 233 aa14.77□□□□□ -0.05
COL4A1-204ENST00000543140 ADAM10O14672 748 aa14.77□□□□□ -0.05
COL4A1-204ENST00000543140 SEC14L5O43304 696 aa14.77□□□□□ -0.05
COL4A1-204ENST00000543140 RENP00797 406 aa14.77□□□□□ -0.05
COL4A1-204ENST00000543140 SQSTM1Q13501 440 aa14.77□□□□□ -0.05
COL4A1-204ENST00000543140 C1orf140Q5VVS0 124 aa14.77□□□□□ -0.05
COL4A1-204ENST00000543140 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.77□□□□□ -0.05
COL4A1-204ENST00000543140 TIGD4Q8IY51 512 aa14.77□□□□□ -0.05
COL4A1-204ENST00000543140 OR6N2Q8NGY6 317 aa14.77□□□□□ -0.05
COL4A1-204ENST00000543140 OR2T4Q8NH00 348 aa14.77□□□□□ -0.05
COL4A1-204ENST00000543140 SUSD2Q9UGT4 822 aa14.77□□□□□ -0.05
COL4A1-204ENST00000543140 MOKQ9UQ07 419 aa14.77□□□□□ -0.05
COL4A1-204ENST00000543140 ACOD1A6NK06 481 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 AKR7A3O95154 331 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 ZFPL1O95159 310 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 KIR2DL3P43628 341 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 CENPAP49450 140 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 CCDC58Q4VC31 144 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 EMC4Q5J8M3 183 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 OVCH1Q7RTY7 1134 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 DPY19L4Q7Z388 723 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 GRINAQ7Z429 371 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 LRRC28Q86X40 367 aaPredicted RBP14.76□□□□□ -0.05
COL4A1-204ENST00000543140 KDM8Q8N371 416 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 YIPF7Q8N8F6 280 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 OR5H6Q8NGV6 325 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 RNF166Q96A37 237 aaPredicted RBP14.76□□□□□ -0.05
COL4A1-204ENST00000543140 MRPL48Q96GC5 212 aaKnown RBP14.76□□□□□ -0.05
COL4A1-204ENST00000543140 TTYH2Q9BSA4 534 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 CYSLTR2Q9NS75 346 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 RALGAPA1Q6GYQ0 2036 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 CCDC163A0A0D9SF12 145 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 A0A1B0GTH9 108 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 C19orf67A6NJJ6 358 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 SNRPBP14678 240 aaKnown RBP14.76□□□□□ -0.05
COL4A1-204ENST00000543140 ATF1P18846 271 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 TALDO1P37837 337 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 NKX2-5P52952 324 aaPredicted RBP14.76□□□□□ -0.05
COL4A1-204ENST00000543140 HSF2Q03933 536 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 ACKR1Q16570 336 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 ZNF684Q5T5D7 378 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 FAM69AQ5T7M9 428 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 GPR139Q6DWJ6 353 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 NUP54Q7Z3B4 507 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 PPP1R3BQ86XI6 285 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 TEX19Q8NA77 164 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 ENKURQ8TC29 256 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 IFI44Q8TCB0 444 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 WDR77Q9BQA1 342 aaPredicted RBP14.76□□□□□ -0.05
COL4A1-204ENST00000543140 NDEL1Q9GZM8 345 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 NOX4Q9NPH5 578 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 MED11Q9P086 117 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 MRM2Q9UI43 246 aaKnown RBP14.76□□□□□ -0.05
COL4A1-204ENST00000543140 IKZF2Q9UKS7 526 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 VDAC3Q9Y277 283 aa14.76□□□□□ -0.05
COL4A1-204ENST00000543140 A8MVM7 634 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 XKRYO14609 159 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 CCNKO75909 580 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 ARL6IP5O75915 188 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 HOXA6P31267 233 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 HTR3AP46098 478 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 INPP1P49441 399 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 CEP78Q5JTW2 689 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 SLC6A19Q695T7 634 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 THEM6Q8WUY1 208 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 KCTD12Q96CX2 325 aaKnown RBP14.75□□□□□ -0.05
COL4A1-204ENST00000543140 WACQ9BTA9 647 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 CRB3Q9BUF7 120 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 HDHD2Q9H0R4 259 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 SLC25A18Q9H1K4 315 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 TSPAN10Q9H1Z9 355 aaPredicted RBP14.75□□□□□ -0.05
COL4A1-204ENST00000543140 LAMP5Q9UJQ1 280 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 CPAMD8Q8IZJ3 1885 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 TRAV1-2A0A0B4J238 106 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 MEIOCA2RUB1 952 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 TMEM200CA6NKL6 621 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 H3BSH0 61 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 FLRT2O43155 660 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 NPIPB7O75200 414 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 HLA-DQA2P01906 255 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 UCHL1P09936 223 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 IL11P20809 199 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 TMED10P49755 219 aaKnown RBP14.75□□□□□ -0.05
COL4A1-204ENST00000543140 SLC26A5P58743 744 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 HSD17B12Q53GQ0 312 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 EEF1A1P5Q5VTE0 462 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 LIPNQ5VXI9 398 aa14.75□□□□□ -0.05
COL4A1-204ENST00000543140 ZNF57Q68EA5 555 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms