RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 HBMQ6B0K9 141 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 LPCAT3Q6P1A2 487 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 SLC16A14Q7RTX9 510 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 MRPL10Q7Z7H8 261 aaKnown RBP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 SCD5Q86SK9 330 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 TTC9BQ8N6N2 239 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 OR4A16Q8NH70 328 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 SEC22CQ9BRL7 303 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 TMEM59Q9BXS4 323 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 LINC00597Q9H2U6 94 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 GAR1Q9NY12 217 aaKnown RBP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 IGKV6-21A0A0C4DH24 114 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 SUSD5O60279 629 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 TUSC2O75896 110 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 OLFM2O95897 454 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 GASTP01350 101 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 PSMB1P20618 241 aaKnown RBP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 HTR2CP28335 458 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 VASPP50552 380 aaPredicted RBP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 RPS25P62851 125 aaKnown RBP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 GPLD1P80108 840 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 MAT1AQ00266 395 aaKnown RBP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 CAMK2BQ13554 666 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 HRASLSQ9HDD0 168 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 EMCNQ9ULC0 261 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 WIF1Q9Y5W5 379 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 PRSS38A1L453 326 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 ARHGAP33O14559 1287 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 MRPL33O75394 65 aaKnown RBP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 OR7C1O76099 320 aaPredicted RBP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 GPR75O95800 540 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 LGI1O95970 557 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 ALPLP05186 524 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 TACR3P29371 465 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 CLDN2P57739 230 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 IKZF1Q13422 519 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 LTC4SQ16873 150 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 CTSL3PQ5NE16 218 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 OGFOD3Q6PK18 319 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 RABEPKQ7Z6M1 372 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 FJX1Q86VR8 437 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 OR2T11Q8NH01 316 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 RHBDD1Q8TEB9 315 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 C20orf24Q9BUV8 137 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 NARFLQ9H6Q4 476 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 NALCNQ8IZF0 1738 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 FAM155AB1AL88 458 aaPredicted RBP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 SMAD6O43541 496 aaKnown RBP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 C1QBP02746 253 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 OR8G3PP0DMU2 310 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 PRLHRP49683 370 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 RAB11AP62491 216 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 HBA1P69905 142 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 TMEM71Q6P5X7 295 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 CD300LGQ6UXG3 332 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 NPSR1Q6W5P4 371 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 LRRTM3Q86VH5 581 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 FRMD1Q8N878 549 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 PNPLA1Q8N8W4 532 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 OR11L1Q8NGX0 322 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 OR1E3Q8WZA6 343 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 ZNF582Q96NG8 517 aaPredicted RBP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 AMDHD1Q96NU7 426 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 NKX2-4Q9H2Z4 354 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 BOKQ9UMX3 212 aaPredicted RBP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 HNF4GQ14541 408 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 CNTN4Q8IWV2 1026 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 SLC7A6Q92536 515 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 SHISA4Q96DD7 197 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 PARD6AQ9NPB6 346 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 HOXC11O43248 304 aaPredicted RBP9.22□□□□□ -0.93
COL4A6-208ENST00000538570 SCG5P05408 212 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 OR2T7P0C7T2 308 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 ARSAP15289 507 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 NQO2P16083 231 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 CNR1P21554 472 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 AOAHP28039 575 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 SNCAP37840 140 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 RPL13AP40429 203 aaKnown RBP9.22□□□□□ -0.93
COL4A6-208ENST00000538570 MTNR1BP49286 362 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 NTHL1P78549 312 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 SMN1Q16637 294 aaKnown RBP9.22□□□□□ -0.93
COL4A6-208ENST00000538570 OPN5Q6U736 354 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 TMUB2Q71RG4 321 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 WDR5BQ86VZ2 330 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 TCEAL8Q8IYN2 117 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 OR2T27Q8NH04 317 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 LGALS14Q8TCE9 139 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 KLF16Q9BXK1 252 aaPredicted RBP9.22□□□□□ -0.93
COL4A6-208ENST00000538570 GSX2Q9BZM3 304 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 PIGMQ9H3S5 423 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 DCAF16Q9NXF7 216 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 GAB2Q9UQC2 676 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 ACOD1A6NK06 481 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 ZNF264O43296 627 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 KCNK5O95279 499 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 FOLR1P15328 257 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 OR2B8PP59922 312 aa9.22□□□□□ -0.93
COL4A6-208ENST00000538570 CHRNEQ04844 493 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms