RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, human

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-205	ENST00000536107	GTF2E2	P29084	291 aa	Known RBP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	EIF1	P41567	113 aa	Known RBP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	CAPZA2	P47755	286 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	EMD	P50402	254 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	EFNB2	P52799	333 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	AP1S2	P56377	157 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	FGF12	P61328	243 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	SEC61A1	P61619	476 aa	Known RBP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	PSPH	P78330	225 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	GALK2	Q01415	458 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	LCP2	Q13094	533 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	DDX39B	Q13838	428 aa	Known RBP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	KRT31	Q15323	416 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	OASL	Q15646	514 aa	Known RBP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	PLPPR5	Q32ZL2	321 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	PAGE2B	Q5JRK9	111 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	LCE1F	Q5T754	118 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	C1QTNF12	Q5T7M4	302 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	CLEC6A	Q6EIG7	209 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	SFRP4	Q6FHJ7	346 aa	Predicted RBP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	OVCH2	Q7RTZ1	564 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	LRP11	Q86VZ4	500 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	MUC20	Q8N307	709 aa	Predicted RBP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	SPIC	Q8N5J4	248 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	FAM71D	Q8N9W8	422 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	MLKL	Q8NB16	471 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	OR4N2	Q8NGD1	307 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	OSR1	Q8TAX0	266 aa	Predicted RBP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	ZNF75CP	Q92670	426 aa	Predicted RBP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	PEX13	Q92968	403 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	NEURL3	Q96EH8	262 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	ELMOD3	Q96FG2	381 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	FYTTD1	Q96QD9	318 aa	Known RBP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	OR5B2	Q96R09	309 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	NDN	Q99608	321 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	DCTN5	Q9BTE1	182 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	RTN4R	Q9BZR6	473 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	OR51B5	Q9H339	312 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	SAP30L	Q9HAJ7	183 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	XAB2	Q9HCS7	855 aa	Known RBP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	OBP2B	Q9NPH6	170 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	HINT3	Q9NQE9	182 aa	Known RBP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	PFDN4	Q9NQP4	134 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	TMEM45A	Q9NWC5	275 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	LYAR	Q9NX58	379 aa	Known RBP	3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	TAAR3P	Q9P1P4	343 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	UVRAG	Q9P2Y5	699 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	GLS2	Q9UI32	602 aa		3.21	□□□□□ -1.9
YBX3-205	ENST00000536107	IGHV2-70D	A0A0C4DH43	119 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107		A0A0U1RQK1	487 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	PRSS29P	A6NIE9	313 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	C17orf100	A8MU93	164 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	MYO1G	B0I1T2	1018 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	GPR171	O14626	319 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	ERAL1	O75616	437 aa	Known RBP	3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	SCEL	O95171	688 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	LGI1	O95970	557 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	MT-ND5	P03915	603 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	THY1	P04216	161 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	PTMA	P06454	111 aa	Known RBP	3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	CT45A8	P0DMV1	189 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	CT45A9	P0DMV2	189 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	S1PR1	P21453	382 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	NMBR	P28336	390 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	KIR2DS4	P43632	304 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	RPS23	P62266	143 aa	Known RBP	3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	FOXF1	Q12946	379 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	THOC5	Q13769	683 aa	Known RBP	3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	PDE7A	Q13946	482 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	HABP2	Q14520	560 aa	Predicted RBP	3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	CCNG2	Q16589	344 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	DECR1	Q16698	335 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	TRMT5	Q32P41	509 aa	Known RBP	3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	TRMT12	Q53H54	448 aa	Known RBP	3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	CT45A2	Q5DJT8	189 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	LRRC38	Q5VT99	294 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	PAQR6	Q6TCH4	344 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	C6orf89	Q6UWU4	347 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	PIWIL3	Q7Z3Z3	882 aa	Known RBP	3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	PDZD9	Q8IXQ8	264 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	ZBED8	Q8IZ13	594 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	GATS	Q8NAP1	163 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	WDR20	Q8TBZ3	569 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	ACTL9	Q8TC94	416 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	CD200R1	Q8TD46	325 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	MGARP	Q8TDB4	240 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	CHAC2	Q8WUX2	184 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	RAB40A	Q8WXH6	277 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	ZHX1-C8orf76	Q96EF9	292 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	CMTM7	Q96FZ5	175 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	NKX3-1	Q99801	234 aa	Predicted RBP	3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	FAM167B	Q9BTA0	163 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	MCRIP2	Q9BUT9	160 aa	Known RBP	3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	CAPS2	Q9BXY5	557 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	MS4A8	Q9BY19	250 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	NT5DC2	Q9H857	520 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	EDA2R	Q9HAV5	297 aa		3.2	□□□□□ -1.9
YBX3-205	ENST00000536107	PATZ1	Q9HBE1	687 aa	Known RBP	3.2	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 159 ms