RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 IL11P20809 199 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 PTNP21246 168 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 TCEA1P23193 301 aaKnown RBP18.64■□□□□ 0.57
PKP3-205ENST00000527442 CHMP24386 653 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 FPR3P25089 353 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 GSSP48637 474 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 CLK1P49759 484 aaKnown RBP18.64■□□□□ 0.57
PKP3-205ENST00000527442 GFRA1P56159 465 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 SYT14P1Q58G82 188 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 CD300LDQ6UXZ3 194 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 GNPDA2Q8TDQ7 276 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 DDIT4LQ96D03 193 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 BPIFA2Q96DR5 249 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 FAM46AQ96IP4 442 aaKnown RBP18.64■□□□□ 0.57
PKP3-205ENST00000527442 SFXN2Q96NB2 322 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 RDH12Q96NR8 316 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 NIPSNAP1Q9BPW8 284 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 PTDSS2Q9BVG9 487 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 SMURF2Q9HAU4 748 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 POFUT2Q9Y2G5 429 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 MXRA5Q9NR99 2828 aa18.64■□□□□ 0.57
PKP3-205ENST00000527442 ZC3H12DA2A288 527 aaKnown RBP18.63■□□□□ 0.57
PKP3-205ENST00000527442 H0YJX3 145 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 MSTNO14793 375 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 AHSA1O95433 338 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 TGM6O95932 706 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 CCNA2P20248 432 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 GSTM3P21266 225 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 CRYGSP22914 178 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 IGFBP5P24593 272 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 CCKARP32238 428 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 LHX2P50458 406 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 RAC1P63000 192 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 TSPAN31Q12999 210 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 C1orf140Q5VVS0 124 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 ANKRD34AQ69YU3 496 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 LSRQ86X29 649 aaPredicted RBP18.63■□□□□ 0.57
PKP3-205ENST00000527442 PARP8Q8N3A8 854 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 MAGEE2Q8TD90 523 aaPredicted RBP18.63■□□□□ 0.57
PKP3-205ENST00000527442 LIPHQ8WWY8 451 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 SGTBQ96EQ0 304 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 HS3ST6Q96QI5 342 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 POTEKPQ9BYX7 375 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 ZNF556Q9HAH1 456 aa18.63■□□□□ 0.57
PKP3-205ENST00000527442 SMNDC1O75940 238 aaKnown RBP eCLIP18.62■□□□□ 0.579e-6■■■■□ 21.6
PKP3-205ENST00000527442 GPR4P46093 362 aa18.62■□□□□ 0.57
PKP3-205ENST00000527442 COX10Q12887 443 aa18.62■□□□□ 0.57
PKP3-205ENST00000527442 ZNF74Q16587 644 aa18.62■□□□□ 0.57
PKP3-205ENST00000527442 RFX4Q33E94 735 aa18.62■□□□□ 0.57
PKP3-205ENST00000527442 FAM69AQ5T7M9 428 aa18.62■□□□□ 0.57
PKP3-205ENST00000527442 VWA1Q6PCB0 445 aa18.62■□□□□ 0.57
PKP3-205ENST00000527442 SLC46A3Q7Z3Q1 461 aa18.62■□□□□ 0.57
PKP3-205ENST00000527442 CDK20Q8IZL9 346 aa18.62■□□□□ 0.57
PKP3-205ENST00000527442 NANOS1Q8WY41 292 aaKnown RBP18.62■□□□□ 0.57
PKP3-205ENST00000527442 KTI12Q96EK9 354 aaPredicted RBP18.62■□□□□ 0.57
PKP3-205ENST00000527442 GPA33Q99795 319 aa18.62■□□□□ 0.57
PKP3-205ENST00000527442 OR11A1Q9GZK7 315 aa18.62■□□□□ 0.57
PKP3-205ENST00000527442 PAPOLBQ9NRJ5 636 aaKnown RBP18.62■□□□□ 0.57
PKP3-205ENST00000527442 KRT84Q9NSB2 600 aa18.62■□□□□ 0.57
PKP3-205ENST00000527442 ZNF226Q9NYT6 803 aa18.62■□□□□ 0.57
PKP3-205ENST00000527442 AP4B1Q9Y6B7 739 aa18.62■□□□□ 0.57
PKP3-205ENST00000527442 GJE1A6NN92 205 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 H3BML4 177 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 OR2T1O43869 369 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 OR7A10O76100 309 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 CNOT4O95628 575 aaKnown RBP18.61■□□□□ 0.57
PKP3-205ENST00000527442 MT-ATP6P00846 226 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 BGLAPP02818 100 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 MAKP20794 623 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 LOXP28300 417 aaPredicted RBP18.61■□□□□ 0.57
PKP3-205ENST00000527442 CD79BP40259 229 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 SLC9A3P48764 834 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 RAD23AP54725 363 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 CLDN18P56856 261 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 EEF1A1P5Q5VTE0 462 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 KLHL17Q6TDP4 642 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 C20orf204Q6ZNR8 217 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 GALNT4Q8N4A0 578 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 GTPBP3Q969Y2 492 aaKnown RBP18.61■□□□□ 0.57
PKP3-205ENST00000527442 STARD4Q96DR4 205 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 MED18Q9BUE0 208 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 FKRPQ9H9S5 495 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 SMPD3Q9NY59 655 aaPredicted RBP18.61■□□□□ 0.57
PKP3-205ENST00000527442 ENOPH1Q9UHY7 261 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 HDGFL3Q9Y3E1 203 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 ZNF337Q9Y3M9 751 aa18.61■□□□□ 0.57
PKP3-205ENST00000527442 EFCAB9A8MZ26 197 aa18.6■□□□□ 0.57
PKP3-205ENST00000527442 FTCDNL1E5RQL4 147 aa18.6■□□□□ 0.57
PKP3-205ENST00000527442 DLGAP1O14490 977 aa18.6■□□□□ 0.57
PKP3-205ENST00000527442 CDC42EP2O14613 210 aa18.6■□□□□ 0.57
PKP3-205ENST00000527442 PEPDP12955 493 aa18.6■□□□□ 0.57
PKP3-205ENST00000527442 ZNF708P17019 499 aa18.6■□□□□ 0.57
PKP3-205ENST00000527442 SHC1P29353 583 aa18.6■□□□□ 0.57
PKP3-205ENST00000527442 IDUAP35475 653 aa18.6■□□□□ 0.57
PKP3-205ENST00000527442 PTH2RP49190 550 aa18.6■□□□□ 0.57
PKP3-205ENST00000527442 ZNF474Q6S9Z5 364 aaPredicted RBP18.6■□□□□ 0.57
PKP3-205ENST00000527442 IZUMO2Q6UXV1 221 aa18.6■□□□□ 0.57
PKP3-205ENST00000527442 RASSF6Q6ZTQ3 369 aa18.6■□□□□ 0.57
PKP3-205ENST00000527442 CLDN22Q8N7P3 220 aa18.6■□□□□ 0.57
PKP3-205ENST00000527442 MFSD8Q8NHS3 518 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms