RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 SLC2A5P22732 501 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 AHCYP23526 432 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 MST1P26927 711 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 TGFBR2P37173 567 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 DAP3P51398 398 aaKnown RBP9.26□□□□□ -0.93
HDAC3-214ENST00000495485 RPL27P61353 136 aaKnown RBP9.26□□□□□ -0.93
HDAC3-214ENST00000495485 MRPL28Q13084 256 aaKnown RBP9.26□□□□□ -0.93
HDAC3-214ENST00000495485 SELENBP1Q13228 472 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 TPBGQ13641 420 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 FHL1Q13642 323 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 GGTLC2Q14390 218 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 MOGQ16653 247 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 PLPPR5Q32ZL2 321 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 LEG1Q6P5S2 330 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 DNM1P34Q6PK57 102 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 H1FNTQ75WM6 255 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-214ENST00000495485 KCTD20Q7Z5Y7 419 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 LHFPL3Q86UP9 236 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 CROCCP3Q8IVE0 287 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 SDR9C7Q8NEX9 313 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 OR2M3Q8NG83 312 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 SMPDL3BQ92485 455 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 C1GALT1C1Q96EU7 318 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 TMEM41AQ96HV5 264 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 MOGAT1Q96PD6 335 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 OR5M11Q96RB7 305 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 SMAD5Q99717 465 aaKnown RBP9.26□□□□□ -0.93
HDAC3-214ENST00000495485 ENKD1Q9H0I2 346 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 TXNIPQ9H3M7 391 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 GALNT9Q9HCQ5 603 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 EXOSC4Q9NPD3 245 aaKnown RBP9.26□□□□□ -0.93
HDAC3-214ENST00000495485 TRIM36Q9NQ86 728 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 KLHL1Q9NR64 748 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 NDUFB11Q9NX14 153 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 VDAC3Q9Y277 283 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 B3GALT5Q9Y2C3 310 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 LSM2Q9Y333 95 aaKnown RBP9.26□□□□□ -0.93
HDAC3-214ENST00000495485 HDGFL3Q9Y3E1 203 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 TMEM14AQ9Y6G1 99 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 A3GALT2U3KPV4 340 aa9.26□□□□□ -0.93
HDAC3-214ENST00000495485 SVILO95425 2214 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 MPDZO75970 2070 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 LOC100506127A0A0U1RQW1 187 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 C2orf72A6NCS6 295 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 ARGFXA6NJG6 315 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 NPIPB13A6NJU9 1138 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 C12orf71A8MTZ7 269 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 NPIPB4C9JG80 1138 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 ZNF670-ZNF695F2Z2N8 137 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 SNPHO15079 494 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 ZNF354AO60765 605 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-214ENST00000495485 IGHMP01871 453 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 HLA-DPB1P04440 258 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 TACSTD2P09758 323 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 NR2C1P13056 603 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 ZNF182P17025 639 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-214ENST00000495485 GADD45AP24522 165 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 PCSK6P29122 969 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 CRABP1P29762 137 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 GRPRP30550 384 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 PTGDSP41222 190 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 CYB561P49447 251 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 DIO1P49895 249 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 VBP1P61758 197 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 PUDPQ08623 228 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 KRR1Q13601 381 aaKnown RBP9.25□□□□□ -0.93
HDAC3-214ENST00000495485 ACER2Q5QJU3 275 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 ZNF362Q5T0B9 420 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-214ENST00000495485 ABHD17BQ5VST6 288 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 AGAP7PQ5VUJ5 663 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 OR5M10Q6IEU7 315 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 C19orf48Q6RUI8 117 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 IGFL3Q6UXB1 125 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 IGFN1Q86VF2 1251 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 PHC2Q8IXK0 858 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 ARIH2OSQ8N7S6 290 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 FADS6Q8N9I5 356 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 LRRC75AQ8NAA5 344 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 CYB561A3Q8NBI2 242 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 NPEPL1Q8NDH3 523 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 ADPRHL1Q8NDY3 354 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 BBS1Q8NFJ9 593 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 OR10H4Q8NGA5 316 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 OR4F15Q8NGB8 312 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 FNDC8Q8TC99 324 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 GATAD2BQ8WXI9 593 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 THOC3Q96J01 351 aaKnown RBP9.25□□□□□ -0.93
HDAC3-214ENST00000495485 C5orf34Q96MH7 638 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 AGAP4Q96P64 663 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 OPALINQ96PE5 141 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 NMNAT3Q96T66 252 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 PIGQQ9BRB3 760 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 ALG8Q9BVK2 526 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 RNF32Q9H0A6 362 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 DCSTAMPQ9H295 470 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 KCNN2Q9H2S1 579 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 MMP27Q9H306 513 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 MED20Q9H944 212 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 HMG20AQ9NP66 347 aa9.25□□□□□ -0.93
HDAC3-214ENST00000495485 CHST11Q9NPF2 352 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms