RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 GCNT2Q8N0V5 402 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 LNX2Q8N448 690 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 C9orf106Q8NAJ2 232 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 SDR9C7Q8NEX9 313 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 OR4K13Q8NH42 304 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 TFAP2CQ92754 450 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 HRASLS5Q96KN8 279 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 PITX2Q99697 317 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 NDRG4Q9ULP0 352 aaKnown RBP17.25■□□□□ 0.35
USP39-218ENST00000493829 GPR52Q9Y2T5 361 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 ZNF175Q9Y473 711 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 FAM215AQ9Y5M1 114 aa17.25■□□□□ 0.35
USP39-218ENST00000493829 SLC16A6O15403 523 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 WDR1O75083 606 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 VAMP5O95183 116 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 FCGR2AP12318 317 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 HIST1H1CP16403 213 aaKnown RBP17.24■□□□□ 0.35
USP39-218ENST00000493829 ACVR2AP27037 513 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 GRK5P34947 590 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 ACVR1BP36896 505 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 DAP3P51398 398 aaKnown RBP17.24■□□□□ 0.35
USP39-218ENST00000493829 KRR1Q13601 381 aaKnown RBP17.24■□□□□ 0.35
USP39-218ENST00000493829 MESTQ5EB52 335 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 TTC23Q5W5X9 447 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 RTL6Q6ICC9 239 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 CREB3L2Q70SY1 520 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 ADGRE4PQ86SQ3 457 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 ST6GALNAC3Q8NDV1 305 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 ASB10Q8WXI3 467 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 UBE2FQ969M7 185 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 OTULINQ96BN8 352 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 PLEKHA8Q96JA3 519 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 CNBD2Q96M20 576 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 MUS81Q96NY9 551 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 TXNIPQ9H3M7 391 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 CALHM2Q9HA72 323 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 IMPAD1Q9NX62 359 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 KLHL9Q9P2J3 617 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 AASSQ9UDR5 926 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 ING1Q9UK53 422 aaPredicted RBP17.24■□□□□ 0.35
USP39-218ENST00000493829 FLVCR1Q9Y5Y0 555 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 SHANK1Q9Y566 2161 aa17.24■□□□□ 0.35
USP39-218ENST00000493829 IMPA2O14732 288 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 BCL10O95999 233 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 GABRA1P14867 456 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 SDHAP31040 664 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 CDC42P60953 191 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 RPL27P61353 136 aaKnown RBP17.23■□□□□ 0.35
USP39-218ENST00000493829 IL5RAQ01344 420 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 RUNX1T1Q06455 604 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 KEAP1Q14145 624 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 SNAPC1Q16533 368 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 DOLPP1Q86YN1 238 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 TUSC5Q8IXB3 177 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 SLC43A2Q8N370 569 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 OR52E2Q8NGJ4 325 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 SLC38A2Q96QD8 506 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 IL4I1Q96RQ9 567 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 SF3B5Q9BWJ5 86 aaKnown RBP17.23■□□□□ 0.35
USP39-218ENST00000493829 TEX12Q9BXU0 123 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 FN3KQ9H479 309 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 FANCFQ9NPI8 374 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 RASSF1Q9NS23 344 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 BAIAP2Q9UQB8 552 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 ZFYVE26Q68DK2 2539 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 H0YAE9 185 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 SURF4O15260 269 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 PRKYO43930 277 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 IGHMP01871 453 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 SIRPAP78324 504 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.23■□□□□ 0.35
USP39-218ENST00000493829 MRPL49Q13405 166 aaKnown RBP17.23■□□□□ 0.35
USP39-218ENST00000493829 RNPS1Q15287 305 aaKnown RBP17.23■□□□□ 0.35
USP39-218ENST00000493829 POU4F3Q15319 338 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 NSUN5P2Q63ZY6 315 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 JAZF1Q86VZ6 243 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 ZIC4Q8N9L1 334 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 CYB561A3Q8NBI2 242 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 TP63Q9H3D4 680 aaPredicted RBP17.23■□□□□ 0.35
USP39-218ENST00000493829 RNF122Q9H9V4 155 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 RAB26Q9ULW5 256 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 ZNF835Q9Y2P0 537 aa17.23■□□□□ 0.35
USP39-218ENST00000493829 TRGV8A0A0C4DH27 118 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 FAM183AA6NL82 134 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 RIIAD1A6NNX1 92 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 E9PQ18 207 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 XKRYO14609 159 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 ARHGEF9O43307 516 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 CAMK2DQ13557 499 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 ARMC4Q5T2S8 1044 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 ZNF691Q5VV52 312 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 NIPAL3Q6P499 406 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 LEG1Q6P5S2 330 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 NCCRP1Q6ZVX7 275 aaPredicted RBP17.22■□□□□ 0.35
USP39-218ENST00000493829 PTCHD4Q6ZW05 846 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 TCEANCQ8N8B7 351 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 SYT14Q8NB59 555 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 ZNF519Q8TB69 540 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 NMNAT3Q96T66 252 aa17.22■□□□□ 0.35
USP39-218ENST00000493829 APOL4Q9BPW4 351 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms