RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 SMARCB1Q12824 385 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 CYLC2Q14093 348 aaPredicted RBP3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 CRMP1Q14194 572 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 FZD2Q14332 565 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 ABRAXAS2Q15018 415 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 CST6Q15828 149 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 CAMK4Q16566 473 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 PDK4Q16654 411 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 PCK2Q16822 640 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 C9orf66Q5T8R8 295 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 LEMD1Q68G75 181 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 SCYL2Q6P3W7 929 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 RFWD3Q6PCD5 774 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 NIPA1Q7RTP0 329 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 PLA2G4DQ86XP0 818 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 ABHD12Q8N2K0 398 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 C4orf32Q8N8J7 132 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 OR6C4Q8NGE1 309 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 RFESDQ8TAC1 157 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 PIBF1Q8WXW3 757 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 NR4A3Q92570 626 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 C18orf25Q96B23 403 aaPredicted RBP3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 AKR1E2Q96JD6 320 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 ZNF599Q96NL3 588 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 RMND5AQ9H871 391 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 POLD4Q9HCU8 107 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 MDFICQ9P1T7 246 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 CIDEBQ9UHD4 219 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 PHF3Q92576 2039 aaKnown RBP3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 HECTD4Q9Y4D8 3996 aa3.85□□□□□ -1.79
SSX2IP-208ENST00000490476 IGHV3OR16-10A0A075B7F0 116 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 IGHV3-16A0A0C4DH30 117 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 A0A0J9YWU9 116 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 NKX2-6A6NCS4 301 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 SHISA9B4DS77 424 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 E9PQ18 207 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 HIP1O00291 1037 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 PPIHO43447 177 aaKnown RBP3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 CYTH3O43739 400 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 TYROBPO43914 113 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 KIAA0754O94854 1291 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 KRT8P05787 483 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 WNT2P09544 360 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 HTR2AP28223 471 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 C1orf61Q13536 156 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 CHI3L2Q15782 390 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 ZIC1Q15915 447 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 RABGAP1LQ5R372 815 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 ATAD3BQ5T9A4 648 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 PAQR6Q6TCH4 344 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 DPY19L4Q7Z388 723 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 ACOT1Q86TX2 421 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 TRIM69Q86WT6 500 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 DENND6BQ8NEG7 585 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 TBCKQ8TEA7 893 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 TTYH2Q9BSA4 534 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 PSTPIP2Q9H939 334 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 APOBEC3BQ9UH17 382 aaKnown RBP3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 MLXQ9UH92 298 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 RNF24Q9Y225 148 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 MEMO1Q9Y316 297 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 EXOSC1Q9Y3B2 195 aaKnown RBP3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 CSAG2Q9Y5P2 127 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 STYXL1Q9Y6J8 313 aa3.84□□□□□ -1.79
SSX2IP-208ENST00000490476 EML6Q6ZMW3 1958 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 CCDC88CQ9P219 2028 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 PLCE1Q9P212 2302 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 SPTY2D1-AS1A0A0U1RR47 76 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 FOXI3A8MTJ6 420 aaPredicted RBP3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 SLC31A1O15431 190 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 CHMP2AO43633 222 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 SLC19A2O60779 497 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 MTX2O75431 263 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 STK19P49842 368 aaPredicted RBP3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 ACTG1P63261 375 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 PLOD1Q02809 727 aaPredicted RBP3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 PJVKQ0ZLH3 352 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 MXD4Q14582 209 aaPredicted RBP3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 MRGPRG-AS1Q2M3A8 158 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 LINC01620Q4KN68 170 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 MS4A13Q5J8X5 152 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 CFAP157Q5JU67 520 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 GCNT7Q6ZNI0 430 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 LANCL3Q6ZV70 420 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 KIAA1328Q86T90 577 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 LRRC49Q8IUZ0 686 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 Q8N377 158 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 LIX1Q8N485 282 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 MAPK1IP1LQ8NDC0 245 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 BEST4Q8NFU0 473 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 CRYGNQ8WXF5 182 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 CTNNBL1Q8WYA6 563 aaPredicted RBP3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 ULBP3Q9BZM4 244 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 TRIM15Q9C019 465 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 SLC25A51Q9H1U9 297 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 APMAPQ9HDC9 416 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 L3MBTL1Q9Y468 752 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 PRR14LQ5THK1 2151 aa3.83□□□□□ -1.8
SSX2IP-208ENST00000490476 DMBT1Q9UGM3 2413 aaPredicted RBP3.82□□□□□ -1.8
SSX2IP-208ENST00000490476 DNAJC13O75165 2243 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms