RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 FAM107BQ9H098 131 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 MYLK2Q9H1R3 596 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 CRLF2Q9HC73 371 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 MEPEQ9NQ76 525 aaPredicted RBP11.27□□□□□ -0.61
HDAC1-209ENST00000484305 POU2F3Q9UKI9 436 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 NOX1Q9Y5S8 564 aa11.27□□□□□ -0.61
HDAC1-209ENST00000484305 SLC35F4A4IF30 521 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 TRIM64A6NGJ6 449 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 TRIM64BA6NI03 449 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 C11orf98E9PRG8 122 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 M0R3G1 203 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 NME4O00746 187 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 AKAP8O43823 692 aaKnown RBP11.26□□□□□ -0.61
HDAC1-209ENST00000484305 SERPINI2O75830 405 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 INHBBP09529 407 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 ADORA3P0DMS8 318 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 DRD4P21917 467 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 SLC7A2P52569 658 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 GYS2P54840 703 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 SH3BGRP55822 239 aaPredicted RBP11.26□□□□□ -0.61
HDAC1-209ENST00000484305 TAS2R41P59536 307 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 SELENOWP63302 87 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 TUBA1BP68363 451 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 TUBA4AP68366 448 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 PIN1Q13526 163 aaPredicted RBP11.26□□□□□ -0.61
HDAC1-209ENST00000484305 CEACAM16Q2WEN9 425 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 C1QTNF12Q5T7M4 302 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 C8orf82Q6P1X6 216 aaPredicted RBP11.26□□□□□ -0.61
HDAC1-209ENST00000484305 TUBA1AQ71U36 451 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 ARPINQ7Z6K5 226 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 PXKQ7Z7A4 578 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 DTX2Q86UW9 622 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 C20orf196Q8IYI0 205 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 ANKK1Q8NFD2 765 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 TMEM255BQ8WV15 326 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 DHRS9Q9BPW9 319 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 SLC19A3Q9BZV2 496 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 FKRPQ9H9S5 495 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 EFCAB1Q9HAE3 211 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 OBP2BQ9NPH6 170 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 NANSQ9NR45 359 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 FAIMQ9NVQ4 179 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 TAS2R5Q9NYW4 299 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 RIMS3Q9UJD0 308 aa11.26□□□□□ -0.61
HDAC1-209ENST00000484305 ZFHX3Q15911 3703 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 ARPC4-TTLL3A0A0A6YYG9 625 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 IGHV1-18A0A0C4DH31 117 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 H7C1Q1 480 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 SNX3O60493 162 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 NDUFS7O75251 213 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 SEC14L2O76054 403 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 OR5F1O95221 314 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 ASAH2BP0C7U1 165 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 IFNGR1P15260 489 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 LSP1P33241 339 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 NUDT2P50583 147 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 UGT2B15P54855 530 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 RIPPLY3P57055 190 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 UBE2NP61088 152 aaKnown RBP11.25□□□□□ -0.61
HDAC1-209ENST00000484305 CAMK2DQ13557 499 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 HACD2Q6Y1H2 254 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 SLC46A3Q7Z3Q1 461 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 DEPDC4Q8N2C3 294 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 PFN4Q8NHR9 129 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 MAGEE2Q8TD90 523 aaPredicted RBP11.25□□□□□ -0.61
HDAC1-209ENST00000484305 GTPBP3Q969Y2 492 aaKnown RBP11.25□□□□□ -0.61
HDAC1-209ENST00000484305 LRR1Q96L50 414 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 SLC38A2Q96QD8 506 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 HOPXQ9BPY8 73 aaPredicted RBP11.25□□□□□ -0.61
HDAC1-209ENST00000484305 POLR2J2Q9GZM3 115 aaKnown RBP11.25□□□□□ -0.61
HDAC1-209ENST00000484305 POLR2J3Q9H1A7 115 aaKnown RBP11.25□□□□□ -0.61
HDAC1-209ENST00000484305 ALG2Q9H553 416 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 METRNQ9UJH8 293 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 ZNF229Q9UJW7 825 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 MOKQ9UQ07 419 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 AP3M1Q9Y2T2 418 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 ATP23Q9Y6H3 246 aa11.25□□□□□ -0.61
HDAC1-209ENST00000484305 GMNCA6NCL1 334 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 ZNF503-AS2A6NEH8 195 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 ZNF726A6NNF4 738 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 ZNF99A8MXY4 864 aaPredicted RBP11.24□□□□□ -0.61
HDAC1-209ENST00000484305 ATP6V1G2-DDX39BF2Z307 99 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 CXCR6O00574 342 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 OR6A2O95222 327 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 MT-ND1P03886 318 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 UMPSP11172 480 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 HOXB1P14653 301 aaPredicted RBP11.24□□□□□ -0.61
HDAC1-209ENST00000484305 TTKP33981 857 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 GSK3BP49841 420 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 FABP6P51161 128 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 BIDP55957 195 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 ZP4Q12836 540 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 AGAP6Q5VW22 663 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 SLC35D2Q76EJ3 337 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 VTCN1Q7Z7D3 282 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 CPLX4Q7Z7G2 160 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 OR6N1Q8NGY5 312 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 TRMT61AQ96FX7 289 aaKnown RBP11.24□□□□□ -0.61
HDAC1-209ENST00000484305 BDH2Q9BUT1 245 aa11.24□□□□□ -0.61
HDAC1-209ENST00000484305 GRIP2Q9C0E4 1043 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms