RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 REEP3Q6NUK4 255 aa19.68■□□□□ 0.74
USP42-205ENST00000465073 C20orf196Q8IYI0 205 aa19.68■□□□□ 0.74
USP42-205ENST00000465073 NFKBIDQ8NI38 313 aa19.68■□□□□ 0.74
USP42-205ENST00000465073 CKAP2Q8WWK9 683 aa19.68■□□□□ 0.74
USP42-205ENST00000465073 SLC47A1Q96FL8 570 aa19.68■□□□□ 0.74
USP42-205ENST00000465073 NOX3Q9HBY0 568 aa19.68■□□□□ 0.74
USP42-205ENST00000465073 B3GNT2Q9NY97 397 aa19.68■□□□□ 0.74
USP42-205ENST00000465073 SELENONQ9NZV5 590 aa19.68■□□□□ 0.74
USP42-205ENST00000465073 CMAHPQ9Y471 501 aa19.68■□□□□ 0.74
USP42-205ENST00000465073 MS4A18H0YCH9 400 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 LILRA1O75019 489 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 ARAFP10398 606 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 NQO1P15559 274 aaKnown RBP19.67■□□□□ 0.74
USP42-205ENST00000465073 CBLP22681 906 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 NR4A1P22736 598 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 PPIBP23284 216 aaKnown RBP19.67■□□□□ 0.74
USP42-205ENST00000465073 STX1BP61266 288 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 MAGOHP61326 146 aaKnown RBP19.67■□□□□ 0.74
USP42-205ENST00000465073 SNTB2Q13425 540 aaKnown RBP19.67■□□□□ 0.74
USP42-205ENST00000465073 MS4A18Q3C1V0 323 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 LRIF1Q5T3J3 769 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 EPGNQ6UW88 154 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 UGT2A3Q6UWM9 527 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 SCAIQ8N9R8 606 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 UBASH3BQ8TF42 649 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 SLC41A3Q96GZ6 507 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 EPYCQ99645 322 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 B3GAT2Q9NPZ5 323 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 SLC25A37Q9NYZ2 338 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 USH1CQ9Y6N9 552 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 A0A087WUJ7 227 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 ADRA2AP08913 450 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 NCALDP61601 193 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 CDK6Q00534 326 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 SRSF2Q01130 221 aaKnown RBP19.67■□□□□ 0.74
USP42-205ENST00000465073 POU3F1Q03052 451 aaPredicted RBP19.67■□□□□ 0.74
USP42-205ENST00000465073 PHYHD1Q5SRE7 291 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 COMTD1Q86VU5 262 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 CDK20Q8IZL9 346 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 LINC01356Q8N9X3 169 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 ASPNQ9BXN1 380 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 TMEM27Q9HBJ8 222 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 TESQ9UGI8 421 aaKnown RBP19.67■□□□□ 0.74
USP42-205ENST00000465073 SPEF1Q9Y4P9 236 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 GMEB1Q9Y692 573 aa19.67■□□□□ 0.74
USP42-205ENST00000465073 PRORSD1PA6NEY8 169 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 TPST1O60507 370 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 SEC14L2O76054 403 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 HPRP00739 348 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 HLA-HP01893 362 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 IGFBP1P08833 259 aaPredicted RBP19.66■□□□□ 0.74
USP42-205ENST00000465073 HLA-DOBP13765 273 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 APEX1P27695 318 aaKnown RBP19.66■□□□□ 0.74
USP42-205ENST00000465073 EVX1P49640 407 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 RIN1Q13671 783 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 GSG1Q2KHT4 349 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 CARD17Q5XLA6 110 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 KRT80Q6KB66 452 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 ZNF627Q7L945 461 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 SNX32Q86XE0 403 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 MSRB3Q8IXL7 192 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 NOX1Q9Y5S8 564 aa19.66■□□□□ 0.74
USP42-205ENST00000465073 CD79AP11912 226 aa19.65■□□□□ 0.74
USP42-205ENST00000465073 IFNGR1P15260 489 aa19.65■□□□□ 0.74
USP42-205ENST00000465073 BLOC1S3Q6QNY0 202 aa19.65■□□□□ 0.74
USP42-205ENST00000465073 NHLRC1Q6VVB1 395 aa19.65■□□□□ 0.74
USP42-205ENST00000465073 ZNF813Q6ZN06 617 aa19.65■□□□□ 0.74
USP42-205ENST00000465073 BHLHE22Q8NFJ8 381 aaPredicted RBP19.65■□□□□ 0.74
USP42-205ENST00000465073 RNF217Q8TC41 542 aa19.65■□□□□ 0.74
USP42-205ENST00000465073 TLCD1Q96CP7 247 aa19.65■□□□□ 0.74
USP42-205ENST00000465073 SNX18Q96RF0 628 aa19.65■□□□□ 0.74
USP42-205ENST00000465073 ZNF607Q96SK3 696 aa19.65■□□□□ 0.74
USP42-205ENST00000465073 EMC6Q9BV81 110 aa19.65■□□□□ 0.74
USP42-205ENST00000465073 SLAMF8Q9P0V8 285 aa19.65■□□□□ 0.74
USP42-205ENST00000465073 TMEFF2Q9UIK5 374 aaPredicted RBP19.65■□□□□ 0.74
USP42-205ENST00000465073 POFUT2Q9Y2G5 429 aa19.65■□□□□ 0.74
USP42-205ENST00000465073 SYNGR3O43761 229 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 TGDSO95455 350 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 BGLAPP02818 100 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 IL2RGP31785 369 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 RGS8P57771 180 aaPredicted RBP19.64■□□□□ 0.73
USP42-205ENST00000465073 PMS2P3Q13401 168 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 OR1Q1Q15612 314 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 TRMT5Q32P41 509 aaKnown RBP19.64■□□□□ 0.73
USP42-205ENST00000465073 GLIPR1L2Q4G1C9 344 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 FUNDC1Q8IVP5 155 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 RFLNBQ8N5W9 214 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 MRPL24Q96A35 216 aaKnown RBP19.64■□□□□ 0.73
USP42-205ENST00000465073 C1orf159Q96HA4 380 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 TXNDC15Q96J42 360 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 DENND2DQ9H6A0 471 aaPredicted RBP19.64■□□□□ 0.73
USP42-205ENST00000465073 TMEM38AQ9H6F2 299 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 EVA1AQ9H8M9 152 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 TCF7L2Q9NQB0 619 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 MRPL39Q9NYK5 338 aaKnown RBP19.64■□□□□ 0.73
USP42-205ENST00000465073 SLC13A4Q9UKG4 626 aa19.64■□□□□ 0.73
USP42-205ENST00000465073 SVEP1Q4LDE5 3571 aa19.63■□□□□ 0.73
USP42-205ENST00000465073 A0A0B4J2E0 115 aa19.63■□□□□ 0.73
USP42-205ENST00000465073 A0A1B0GX12 115 aa19.63■□□□□ 0.73
USP42-205ENST00000465073 ZNF726A6NNF4 738 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms