RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 RAB39BQ96DA2 213 aa10.08□□□□□ -0.8
HCFC1-204ENST00000461098 KTI12Q96EK9 354 aaPredicted RBP10.08□□□□□ -0.8
HCFC1-204ENST00000461098 OXGR1Q96P68 337 aa10.08□□□□□ -0.8
HCFC1-204ENST00000461098 MECRQ9BV79 373 aa10.08□□□□□ -0.8
HCFC1-204ENST00000461098 ASIC5Q9NY37 505 aa10.08□□□□□ -0.8
HCFC1-204ENST00000461098 ZNF69Q9UC07 566 aa10.08□□□□□ -0.8
HCFC1-204ENST00000461098 MARCOQ9UEW3 520 aaPredicted RBP10.08□□□□□ -0.8
HCFC1-204ENST00000461098 PRDM4Q9UKN5 801 aa10.08□□□□□ -0.8
HCFC1-204ENST00000461098 IGLV3-9A0A075B6K5 115 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 IGHV1-69-2A0A0G2JMI3 117 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 COPEO14579 308 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 ZNF500O60304 480 aaPredicted RBP10.07□□□□□ -0.8
HCFC1-204ENST00000461098 SHBGP04278 402 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 DBIP07108 87 aaKnown RBP10.07□□□□□ -0.8
HCFC1-204ENST00000461098 UQCRBP14927 111 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 KRT4P19013 534 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 RPS5P46782 204 aaKnown RBP10.07□□□□□ -0.8
HCFC1-204ENST00000461098 PTDSS1P48651 473 aaKnown RBP10.07□□□□□ -0.8
HCFC1-204ENST00000461098 LCN2P80188 198 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 HPCAP84074 193 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 MMEL1Q495T6 779 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 GLIPR1L2Q4G1C9 344 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 GKAP1Q5VSY0 366 aaPredicted RBP10.07□□□□□ -0.8
HCFC1-204ENST00000461098 ZNF836Q6ZNA1 936 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 RNF130Q86XS8 419 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 VRK2Q86Y07 508 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 C20orf196Q8IYI0 205 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 ZNF440Q8IYI8 595 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 C4orf33Q8N1A6 199 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 CLIP4Q8N3C7 705 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 PIK3C3Q8NEB9 887 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 DEFB108BQ8NET1 73 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 GTF3AQ92664 365 aaKnown RBP10.07□□□□□ -0.8
HCFC1-204ENST00000461098 TUBGCP3Q96CW5 907 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 SLC35A5Q9BS91 424 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 ZMAT3Q9HA38 289 aaKnown RBP10.07□□□□□ -0.8
HCFC1-204ENST00000461098 HINT3Q9NQE9 182 aaKnown RBP10.07□□□□□ -0.8
HCFC1-204ENST00000461098 NKIRAS2Q9NYR9 191 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 PDP1Q9P0J1 537 aaPredicted RBP10.07□□□□□ -0.8
HCFC1-204ENST00000461098 TAAR3PQ9P1P4 343 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 LEF1Q9UJU2 399 aaPredicted RBP10.07□□□□□ -0.8
HCFC1-204ENST00000461098 ZNF346Q9UL40 294 aaKnown RBP10.07□□□□□ -0.8
HCFC1-204ENST00000461098 NOX1Q9Y5S8 564 aa10.07□□□□□ -0.8
HCFC1-204ENST00000461098 LOC102725191A0A1B0GVB3 256 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 A0A1W2PPW3 197 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 MS4A18H0YCH9 400 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 CLDN34H7C241 214 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 HLA-DOBP13765 273 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 ZNF250P15622 560 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 GCH1P30793 250 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 GIPRP48546 466 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 RPS23P62266 143 aaKnown RBP10.06□□□□□ -0.8
HCFC1-204ENST00000461098 RAB1AP62820 205 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 BAMBIQ13145 260 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 RAB39AQ14964 217 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 SLC9A3R2Q15599 337 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 MS4A18Q3C1V0 323 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 COX20Q5RI15 118 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 LEG1Q6P5S2 330 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 RBMS3Q6XE24 437 aaKnown RBP10.06□□□□□ -0.8
HCFC1-204ENST00000461098 ZNF813Q6ZN06 617 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 GSPT2Q8IYD1 628 aaKnown RBP10.06□□□□□ -0.8
HCFC1-204ENST00000461098 PAQR4Q8N4S7 273 aaPredicted RBP10.06□□□□□ -0.8
HCFC1-204ENST00000461098 BHLHE22Q8NFJ8 381 aaPredicted RBP10.06□□□□□ -0.8
HCFC1-204ENST00000461098 TESCQ96BS2 214 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 LRR1Q96L50 414 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 DPY30Q9C005 99 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 GRPEL1Q9HAV7 217 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 MMP26Q9NRE1 261 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 PLEK2Q9NYT0 353 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 NOP53Q9NZM5 478 aaKnown RBP10.06□□□□□ -0.8
HCFC1-204ENST00000461098 NUP50Q9UKX7 468 aa10.06□□□□□ -0.8
HCFC1-204ENST00000461098 PPIAL4EA0A075B759 164 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 A0A096LPI6 279 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 PPIAL4CA0A0B4J2A2 164 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 PPIAL4DF5H284 164 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 M0R082 166 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 AHSA1O95433 338 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 HPRP00739 348 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 PATE4P0C8F1 98 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 PPIAL4FP0DN26 164 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 B4GALT1P15291 398 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 CHI3L1P36222 383 aaPredicted RBP10.05□□□□□ -0.8
HCFC1-204ENST00000461098 CDKN2CP42773 168 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 RAD52P43351 418 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 ERVS71-1P61550 626 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 GALK2Q01415 458 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 HNRNPA0Q13151 305 aaKnown RBP10.05□□□□□ -0.8
HCFC1-204ENST00000461098 MAD2L1Q13257 205 aaPredicted RBP10.05□□□□□ -0.8
HCFC1-204ENST00000461098 GNA13Q14344 377 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 MFSD13AQ14CX5 517 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 NKPD1Q17RQ9 610 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 SMU1Q2TAY7 513 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 PCGF3Q3KNV8 242 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 TMEM255AQ5JRV8 349 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 SPANXN4Q5MJ08 99 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 ANXA8L1Q5VT79 327 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 CARD17Q5XLA6 110 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 ATG16L1Q676U5 607 aa10.05□□□□□ -0.8
HCFC1-204ENST00000461098 USP51Q70EK9 711 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms