RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ME2P23368 584 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 HPDP32754 393 aaPredicted RBP4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 CASP2P42575 452 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 ASMTP46597 345 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 FGF12P61328 243 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 PRAMEP78395 509 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 GALK2Q01415 458 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 ROR2Q01974 943 aaKnown RBP4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 CFHR3Q02985 330 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 C17orf67Q0P5P2 114 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 IFT88Q13099 833 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 SNTB2Q13425 540 aaKnown RBP4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 FHL3Q13643 280 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 PCGF3Q3KNV8 242 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 TRMT12Q53H54 448 aaKnown RBP4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 TSPO2Q5TGU0 170 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 UNQ9370/PRO34162Q6UXP9 181 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 LINC00336Q6ZUF6 198 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 IKBIPQ70UQ0 350 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 CENPUQ71F23 418 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 TMPRSS11BQ86T26 416 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 THOC6Q86W42 341 aaKnown RBP4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 CPNE9Q8IYJ1 553 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 Q8N2B8 174 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 FAM71DQ8N9W8 422 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 SPERTQ8NA61 448 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 EEF1AKMT1Q8WVE0 214 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 CCT6BQ92526 530 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 NEURL3Q96EH8 262 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 MAELQ96JY0 434 aaKnown RBP4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 ARL5BQ96KC2 179 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 VSTM2LQ96N03 204 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 HEMGNQ9BXL5 484 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 MS4A8Q9BY19 250 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 ZNF717Q9BY31 904 aaPredicted RBP4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 TRIM15Q9C019 465 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 LRRC40Q9H9A6 602 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 SCRT2Q9NQ03 307 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 HINT3Q9NQE9 182 aaKnown RBP4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 CHRAC1Q9NRG0 131 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 IARS2Q9NSE4 1012 aaKnown RBP4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 DCAF16Q9NXF7 216 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 MAT2BQ9NZL9 334 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 OR5V1Q9UGF6 321 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 ANAPC5Q9UJX4 755 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 SLC22A14Q9Y267 594 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 KCNE2Q9Y6J6 123 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 PKHD1L1Q86WI1 4243 aa4.22□□□□□ -1.73
SBDSP1-204ENST00000453858 IGHV1-69DA0A0B4J2H0 117 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 ANKRD61A6NGH8 418 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 ANKDD1BA6NHY2 528 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 ZNF195O14628 629 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 IGHV1-69P01742 117 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 THY1P04216 161 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 CBR1P16152 277 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 DIO1P49895 249 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 XKP51811 444 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 TUBA1BP68363 451 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 TUBA4AP68366 448 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 TGM3Q08188 693 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 CBFBQ13951 182 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 PARP6Q2NL67 630 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 AP5B1Q2VPB7 878 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 TMEM95Q3KNT9 176 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 TTLL9Q3SXZ7 439 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 TMEM155Q4W5P6 130 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 TMEM35AQ53FP2 167 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 HSP90AA4PQ58FG1 418 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 ASPHD1Q5U4P2 390 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 FAM90A2PQ658T7 463 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 OR4C11Q6IEV9 310 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 KRT80Q6KB66 452 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 BTNL3Q6UXE8 466 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 TUBA1AQ71U36 451 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 ZNF575Q86XF7 245 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 CCDC50Q8IVM0 306 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 ZCCHC7Q8N3Z6 543 aaKnown RBP4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 C11orf42Q8N5U0 333 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 SRFBP1Q8NEF9 429 aaKnown RBP4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 OR52R1Q8NGF1 315 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 OR2T6Q8NHC8 308 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 MAGEE2Q8TD90 523 aaPredicted RBP4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 C10orf82Q8WW14 230 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 CCL17Q92583 94 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 P3H4Q92791 437 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 WDR34Q96EX3 536 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 PPP1R2P1Q96PQ5 205 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 DDOQ99489 341 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 NABP2Q9BQ15 211 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 TMEM79Q9BSE2 394 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 KLK15Q9H2R5 256 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 HAUS4Q9H6D7 363 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 RANBP3Q9H6Z4 567 aaPredicted RBP4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 EXD2Q9NVH0 621 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 ZNRD1Q9P1U0 126 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 BCAP29Q9UHQ4 241 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 PHF11Q9UIL8 331 aa4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 NOSIPQ9Y314 301 aaKnown RBP4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 UBE2J1Q9Y385 318 aaPredicted RBP4.21□□□□□ -1.74
SBDSP1-204ENST00000453858 GXYLT2A0PJZ3 443 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms