RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 DAP3P51398 398 aaKnown RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 SEC24CP53992 1094 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 CLDN17P56750 224 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 PSME3P61289 254 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 GNGT1P63211 74 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 POU3F1Q03052 451 aaPredicted RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 SELPLGQ14242 412 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 GK3PQ14409 553 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 IFI44LQ53G44 452 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 MTX3Q5HYI7 312 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 GLYATQ6IB77 296 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 NIPAL3Q6P499 406 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 C22orf34Q6ZV56 151 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 TMPRSS11FQ6ZWK6 438 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 DTX2Q86UW9 622 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 C20orf196Q8IYI0 205 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 OFCC1Q8IZS5 231 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 PGAM4Q8N0Y7 254 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 C10orf53Q8N6V4 93 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 FAM156AQ8NDB6 213 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 OR1K1Q8NGR3 316 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 ZNF417Q8TAU3 575 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 SMAP2Q8WU79 429 aaPredicted RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 TMEM239Q8WW34 195 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 ACOT11Q8WXI4 607 aaPredicted RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 AKAP1Q92667 903 aaKnown RBP eCLIP5.61□□□□□ -1.51
USP54-202ENST00000413442 ZNF775Q96BV0 537 aaPredicted RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 PRRC1Q96M27 445 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 ZNF385AQ96PM9 386 aaKnown RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 RBP7Q96R05 134 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 OR2M2Q96R28 347 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 ZNF347Q96SE7 839 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 ZNF587Q96SQ5 575 aaPredicted RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 DHRS9Q9BPW9 319 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 KCTD14Q9BQ13 255 aaPredicted RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 PRSS27Q9BQR3 290 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 TMUB1Q9BVT8 246 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 RSPO3Q9BXY4 272 aaPredicted RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 C1orf21Q9H246 121 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 GPR35Q9HC97 309 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 TUBG2Q9NRH3 451 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 DCAF13Q9NV06 445 aaKnown RBP5.61□□□□□ -1.51
USP54-202ENST00000413442 CMTM6Q9NX76 183 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 TAS2R5Q9NYW4 299 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 B3GAT1Q9P2W7 334 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 TAGLN3Q9UI15 199 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 MAGEL2Q9UJ55 1249 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 SLC7A7Q9UM01 511 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 USP22Q9UPT9 525 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 TMEM5Q9Y2B1 443 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 LRBAP50851 2863 aa5.61□□□□□ -1.51
USP54-202ENST00000413442 A0A1W2PRQ8 180 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 SLC35F4A4IF30 521 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 A6NIZ1 184 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 M0R3H8 397 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 SIAH2O43255 324 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 TRAF3IP2O43734 574 aaPredicted RBP5.6□□□□□ -1.51
USP54-202ENST00000413442 RAMP1O60894 148 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 RAD51DO75771 328 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 KRT36O76013 467 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 OR7A10O76100 309 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 UBL3O95164 117 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 LYPD3O95274 346 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 CH25HO95992 272 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 IGKV3-15P01624 115 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 IGLV1-44P01699 117 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 IGHG1P01857 330 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 UMPSP11172 480 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 KLK2P20151 261 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 TTKP33981 857 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 IFNGR2P38484 337 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 GSK3BP49841 420 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 SELENOPP49908 381 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 NUDT2P50583 147 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 ZNF84P51523 738 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 ZNF133P52736 654 aaPredicted RBP5.6□□□□□ -1.51
USP54-202ENST00000413442 CRYBA2P53672 197 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 RAP1BP61224 184 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 RAP1AP62834 184 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 ADAM8P78325 824 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 HOXC5Q00444 222 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 ROR2Q01974 943 aaKnown RBP5.6□□□□□ -1.51
USP54-202ENST00000413442 PRKCDQ05655 676 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 LTBQ06643 244 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 BSPH1Q075Z2 132 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 DGCR6Q14129 220 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 MOGQ16653 247 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 HIST3H3Q16695 136 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 TBRG1Q3YBR2 411 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 THEM4Q5T1C6 240 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 SLC22A25Q6T423 547 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 UGT2A3Q6UWM9 527 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 SLC35D2Q76EJ3 337 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 NANOGNBQ7Z5D8 188 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 SYT9Q86SS6 491 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 BIVMQ86UB2 503 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 TMEM123Q8N131 208 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 FBXL14Q8N1E6 418 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 WDR31Q8NA23 367 aa5.6□□□□□ -1.51
USP54-202ENST00000413442 NUP37Q8NFH4 326 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms