RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SARAFQ96BY9 339 aa9.4□□□□□ -0.9
COL5A1-202ENST00000371820 RNFT2Q96EX2 444 aa9.4□□□□□ -0.9
COL5A1-202ENST00000371820 SRRQ9GZT4 340 aa9.4□□□□□ -0.9
COL5A1-202ENST00000371820 EXO5Q9H790 373 aa9.4□□□□□ -0.9
COL5A1-202ENST00000371820 SH2D2AQ9NP31 389 aa9.4□□□□□ -0.9
COL5A1-202ENST00000371820 ZFP64Q9NPA5 681 aa9.4□□□□□ -0.9
COL5A1-202ENST00000371820 DIABLOQ9NR28 239 aa9.4□□□□□ -0.9
COL5A1-202ENST00000371820 POLE3Q9NRF9 147 aa9.4□□□□□ -0.9
COL5A1-202ENST00000371820 MAT2BQ9NZL9 334 aa9.4□□□□□ -0.9
COL5A1-202ENST00000371820 DNAJC27Q9NZQ0 273 aa9.4□□□□□ -0.9
COL5A1-202ENST00000371820 KLHL21Q9UJP4 597 aa9.4□□□□□ -0.9
COL5A1-202ENST00000371820 CAB39Q9Y376 341 aaPredicted RBP9.4□□□□□ -0.9
COL5A1-202ENST00000371820 NPFFR2Q9Y5X5 522 aa9.4□□□□□ -0.9
COL5A1-202ENST00000371820 SPIN1Q9Y657 262 aaPredicted RBP9.4□□□□□ -0.9
COL5A1-202ENST00000371820 PCNX1Q96RV3 2341 aa9.4□□□□□ -0.9
COL5A1-202ENST00000371820 F8P00451 2351 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 A0A0G2JMM0 328 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 A0A1W2PPB8 328 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 A0A1W2PRS3 328 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 PINLYPA6NC86 204 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 KIR3DP1A8MWS1 328 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 FMO6PO60774 539 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 CLPSP04118 112 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 HMGN2P05204 90 aaKnown RBP9.39□□□□□ -0.91
COL5A1-202ENST00000371820 CT62P0C5K7 136 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 IL7P13232 177 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 BMP7P18075 431 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 PAICSP22234 425 aaKnown RBP9.39□□□□□ -0.91
COL5A1-202ENST00000371820 HTR1FP30939 366 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 ATP6V1E1P36543 226 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 MAGEA5P43359 124 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 FOXO1Q12778 655 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 QPRTQ15274 297 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 PRSS53Q2L4Q9 553 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 PRAMEF20Q5VT98 475 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 TRIQKQ629K1 86 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 TMEM53Q6P2H8 277 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 PLET1Q6UQ28 207 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 MBOAT2Q6ZWT7 520 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 TRILQ7L0X0 811 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 DUSP18Q8NEJ0 188 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 OR10G3Q8NGC4 313 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 GPR151Q8TDV0 419 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 DOK4Q8TEW6 326 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 SLC35B4Q969S0 331 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 ADIPOR1Q96A54 375 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 CTHRC1Q96CG8 243 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 ELP4Q96EB1 424 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 LCORQ96JN0 433 aaPredicted RBP9.39□□□□□ -0.91
COL5A1-202ENST00000371820 LURAP1Q96LR2 239 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 ZNF681Q96N22 645 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 DMRTA2Q96SC8 542 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 NDEL1Q9GZM8 345 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 FOLH1BQ9HBA9 442 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 RPRD1BQ9NQG5 326 aaKnown RBP9.39□□□□□ -0.91
COL5A1-202ENST00000371820 POLE4Q9NR33 117 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 MAN2C1Q9NTJ4 1040 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 DDX28Q9NUL7 540 aaKnown RBP9.39□□□□□ -0.91
COL5A1-202ENST00000371820 CHCHD2Q9Y6H1 151 aaPredicted RBP9.39□□□□□ -0.91
COL5A1-202ENST00000371820 CACNA1CQ13936 2221 aa9.39□□□□□ -0.91
COL5A1-202ENST00000371820 A0A087WUU8 490 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 TRGV5A0A0B4J1U4 118 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 A0A1B0GVC2 190 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 A0A1W2PQL4 384 aaPredicted RBP9.38□□□□□ -0.91
COL5A1-202ENST00000371820 A0A1W2PS29 197 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 MEIOCA2RUB1 952 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 FAM47E-STBD1D6RA91 191 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 NPIPA2E9PIF3 369 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 NPIPA3F8WFD2 350 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 CASKO14936 926 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 WDR1O75083 606 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 PPM1BO75688 479 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 SERPINA3P01011 423 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 HLA-DQB1P01920 261 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 TP53P04637 393 aaPredicted RBP9.38□□□□□ -0.91
COL5A1-202ENST00000371820 DBIP07108 87 aaKnown RBP9.38□□□□□ -0.91
COL5A1-202ENST00000371820 HOXD4P09016 255 aaPredicted RBP9.38□□□□□ -0.91
COL5A1-202ENST00000371820 GABRA1P14867 456 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 DRD5P21918 477 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 ABCD3P28288 659 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 ERP29P30040 261 aaKnown RBP9.38□□□□□ -0.91
COL5A1-202ENST00000371820 TGFBR1P36897 503 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 TALDO1P37837 337 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 PPICP45877 212 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 PRKAG1P54619 331 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 CDH11P55287 796 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 MRPS15P82914 257 aaKnown RBP9.38□□□□□ -0.91
COL5A1-202ENST00000371820 PLCXD2Q0VAA5 305 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 POU4F2Q12837 409 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 CDSNQ15517 529 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 ARHGAP11BQ3KRB8 267 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 CYP27C1Q4G0S4 372 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 HSD17B12Q53GQ0 312 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 PYDC2Q56P42 97 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 ZNF628Q5EBL2 1059 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 RPS26P11Q5JNZ5 115 aaPredicted RBP9.38□□□□□ -0.91
COL5A1-202ENST00000371820 LIPKQ5VXJ0 399 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 TYW3Q6IPR3 259 aaKnown RBP9.38□□□□□ -0.91
COL5A1-202ENST00000371820 HEPHL1Q6MZM0 1159 aa9.38□□□□□ -0.91
COL5A1-202ENST00000371820 ACSM5Q6NUN0 579 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms