RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 SLC25A16P16260 332 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 ARR3P36575 388 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 LOXL1Q08397 574 aaPredicted RBP15.43■□□□□ 0.06
HDDC3-201ENST00000330334 PUDPQ08623 228 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 PMS2P3Q13401 168 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 CYLC2Q14093 348 aaPredicted RBP15.43■□□□□ 0.06
HDDC3-201ENST00000330334 EFNB3Q15768 340 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 CEACAM16Q2WEN9 425 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 COQ5Q5HYK3 327 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 NUP37Q8NFH4 326 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 OR6T1Q8NGN1 323 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 RNF217Q8TC41 542 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 RASSF5Q8WWW0 418 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 PROX1Q92786 737 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 ZNF837Q96EG3 531 aaPredicted RBP15.43■□□□□ 0.06
HDDC3-201ENST00000330334 MOGAT1Q96PD6 335 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 SH3GL1Q99961 368 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 ATRQ13535 2644 aa15.43■□□□□ 0.06
HDDC3-201ENST00000330334 B9A039 149 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 HLA-DOBP13765 273 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 CBLP22681 906 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 GZMMP51124 257 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 IL1RL1Q01638 556 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 NPTX1Q15818 432 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 TRMT5Q32P41 509 aaKnown RBP15.42■□□□□ 0.06
HDDC3-201ENST00000330334 NANOGP8Q6NSW7 305 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 CCDC80Q76M96 950 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 SNX32Q86XE0 403 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 OR10A6Q8NH74 314 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 C10orf105Q8TEF2 133 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 FAM168AQ92567 244 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 MPP4Q96JB8 637 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 TNFRSF13CQ96RJ3 184 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 SLC19A3Q9BZV2 496 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 NANOGQ9H9S0 305 aa15.42■□□□□ 0.06
HDDC3-201ENST00000330334 SLC35F4A4IF30 521 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 VSTM5A8MXK1 200 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 M0R3H8 397 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 FBP2O00757 339 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 SASH3O75995 380 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 LYPD3O95274 346 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 CD247P20963 164 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 SNRPD2P62316 118 aaKnown RBP15.41■□□□□ 0.06
HDDC3-201ENST00000330334 POU3F1Q03052 451 aaPredicted RBP15.41■□□□□ 0.06
HDDC3-201ENST00000330334 ADIPOQQ15848 244 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 VMACQ2NL98 169 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 ENTPD8Q5MY95 495 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 ZNF525Q8N782 197 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 OR8J3Q8NGG0 315 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 OR5J2Q8NH18 312 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 ADAMTS16Q8TE57 1224 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 FBXO17Q96EF6 278 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 ZNF426Q9BUY5 554 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 PLK3Q9H4B4 646 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 DENND2DQ9H6A0 471 aaPredicted RBP15.41■□□□□ 0.06
HDDC3-201ENST00000330334 ZNF442Q9H7R0 627 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 B3GAT2Q9NPZ5 323 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 B3GNT2Q9NY97 397 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 USP22Q9UPT9 525 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 CR1P17927 2039 aa15.41■□□□□ 0.06
HDDC3-201ENST00000330334 DNHD1Q96M86 4753 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 TRAPPC13A5PLN9 417 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 ZNF726A6NNF4 738 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 M0R3G1 203 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 NDUFS8O00217 210 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 OPN1SWP03999 348 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 THY1P04216 161 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 VIMP08670 466 aaKnown RBP15.4■□□□□ 0.06
HDDC3-201ENST00000330334 OR4A8P0C604 315 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 CALCRP30988 508 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 TUBA1BP68363 451 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 TUBA4AP68366 448 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 ZP4Q12836 540 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 PHYHD1Q5SRE7 291 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 TUBA1AQ71U36 451 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 C10orf53Q8N6V4 93 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 TAMM41Q96BW9 452 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 TXNDC15Q96J42 360 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 EMC6Q9BV81 110 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 MYOZ1Q9NP98 299 aaPredicted RBP15.4■□□□□ 0.06
HDDC3-201ENST00000330334 FKBP7Q9Y680 259 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 ARFGEF3Q5TH69 2177 aa15.4■□□□□ 0.06
HDDC3-201ENST00000330334 LRRN3E7EW58 273 aa15.39■□□□□ 0.05
HDDC3-201ENST00000330334 TROVE2P10155 538 aaKnown RBP eCLIP15.39■□□□□ 0.05
HDDC3-201ENST00000330334 AHCYP23526 432 aa15.39■□□□□ 0.05
HDDC3-201ENST00000330334 CRYBA2P53672 197 aa15.39■□□□□ 0.05
HDDC3-201ENST00000330334 VLDLRP98155 873 aa15.39■□□□□ 0.05
HDDC3-201ENST00000330334 HGFACQ04756 655 aa15.39■□□□□ 0.05
HDDC3-201ENST00000330334 ZNF74Q16587 644 aa15.39■□□□□ 0.05
HDDC3-201ENST00000330334 TMEM249Q2WGJ8 235 aa15.39■□□□□ 0.05
HDDC3-201ENST00000330334 TTC33Q6PID6 262 aaPredicted RBP15.39■□□□□ 0.05
HDDC3-201ENST00000330334 WDR88Q6ZMY6 472 aa15.39■□□□□ 0.05
HDDC3-201ENST00000330334 CALHM3Q86XJ0 350 aa15.39■□□□□ 0.05
HDDC3-201ENST00000330334 HIPK1Q86Z02 1210 aa15.39■□□□□ 0.05
HDDC3-201ENST00000330334 RBM45Q8IUH3 476 aaKnown RBP15.39■□□□□ 0.05
HDDC3-201ENST00000330334 OR4D11Q8NGI4 311 aa15.39■□□□□ 0.05
HDDC3-201ENST00000330334 OR6X1Q8NH79 312 aa15.39■□□□□ 0.05
HDDC3-201ENST00000330334 SLC26A7Q8TE54 656 aa15.39■□□□□ 0.05
HDDC3-201ENST00000330334 NANOS1Q8WY41 292 aaKnown RBP15.39■□□□□ 0.05
HDDC3-201ENST00000330334 HTRA1Q92743 480 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms