RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 OPRL1P41146 370 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 PLA2G7Q13093 441 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 DESI1Q6ICB0 168 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 BHLHE23Q8NDY6 225 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 KHSRPQ92945 711 aaKnown RBP eCLIP12.25□□□□□ -0.45
COL1A1-201ENST00000225964 INTS12Q96CB8 462 aaKnown RBP12.25□□□□□ -0.45
COL1A1-201ENST00000225964 GLTPQ9NZD2 209 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 MOKQ9UQ07 419 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 MMACHCQ9Y4U1 282 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 PCDHGA5Q9Y5G8 931 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 ZNF705GA8MUZ8 300 aaPredicted RBP12.25□□□□□ -0.45
COL1A1-201ENST00000225964 DEGS1O15121 323 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 EIF1P41567 113 aaKnown RBP12.25□□□□□ -0.45
COL1A1-201ENST00000225964 MC2RQ01718 297 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 SLC5A12Q1EHB4 618 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 B3GLCTQ6Y288 498 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 CPEB3Q8NE35 698 aaKnown RBP12.25□□□□□ -0.45
COL1A1-201ENST00000225964 CD300AQ9UGN4 299 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 LINC01553A4QN01 128 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 ACOD1A6NK06 481 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 PPP6CO00743 305 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 ZNF74Q16587 644 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 LEXMQ3ZCV2 418 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 GIMAP1Q8WWP7 306 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 ADAMTS14Q8WXS8 1223 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 EGLN2Q96KS0 407 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 DCLRE1CQ96SD1 692 aaKnown RBP12.25□□□□□ -0.45
COL1A1-201ENST00000225964 CNTNAP3Q9BZ76 1288 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 CSNK1G1Q9HCP0 422 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 PRELID3BQ9Y3B1 194 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 TMEM221A6NGB7 291 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 FBXO24O75426 580 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 SEMA3BQ13214 749 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 Q6ZTK2 550 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 MBOAT2Q6ZWT7 520 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 OR6V1Q8N148 313 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 ZNF75AQ96N20 296 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 HS3ST3A1Q9Y663 406 aa12.25□□□□□ -0.45
COL1A1-201ENST00000225964 RGS11O94810 467 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 HTR2CP28335 458 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 SERPINF1P36955 418 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 TPMTP51580 245 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 SYT9Q86SS6 491 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 PM20D2Q8IYS1 436 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 UTP4Q969X6 686 aaKnown RBP12.24□□□□□ -0.45
COL1A1-201ENST00000225964 PPA2Q9H2U2 334 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 SLA2Q9H6Q3 261 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 ADAMTS5Q9UNA0 930 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 SLC22A23A1A5C7 686 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 ATXN1LP0C7T5 689 aaKnown RBP12.24□□□□□ -0.45
COL1A1-201ENST00000225964 SHHQ15465 462 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 ZNF468Q5VIY5 522 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-201ENST00000225964 NCCRP1Q6ZVX7 275 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-201ENST00000225964 YRDCQ86U90 279 aaKnown RBP12.24□□□□□ -0.45
COL1A1-201ENST00000225964 SORT1Q99523 831 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 OPA3Q9H6K4 179 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 LRRC37A3O60309 1634 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 OR7A17O14581 309 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 IMPA1P29218 277 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 TSPAN31Q12999 210 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 SELPLGQ14242 412 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 TBPL2Q6SJ96 375 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 GDPGP1Q6ZNW5 385 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 CMTM2Q8TAZ6 248 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 BCL7BQ9BQE9 202 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 K7EPK0 472 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 CLDN12P56749 244 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 FOXC1Q12948 553 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 LRRC28Q86X40 367 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-201ENST00000225964 FAM71E2Q8N5Q1 922 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 NMNAT3Q96T66 252 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 NIPAL2Q9H841 368 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 THAP10Q9P2Z0 257 aaPredicted RBP12.24□□□□□ -0.45
COL1A1-201ENST00000225964 RAB40ALP0C0E4 278 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 CATSPERDQ86XM0 798 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 WFDC8Q8IUA0 241 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 RAB40AQ8WXH6 277 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 ELSPBP1Q96BH3 223 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 C3orf49Q96BT1 292 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 FGGYQ96C11 551 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.24□□□□□ -0.45
COL1A1-201ENST00000225964 KIAA1456Q9P272 454 aa12.24□□□□□ -0.45
COL1A1-201ENST00000225964 FZD7O75084 574 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 BCL6P41182 706 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 RAB13P51153 203 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 RAC1P63000 192 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 PGAP1Q75T13 922 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 FAM185AQ8N0U4 392 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 FOXQ1Q9C009 403 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 ERVMER34-1Q9H9K5 563 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 USP3Q9Y6I4 520 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 NRG2O14511 850 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-201ENST00000225964 HLA-DOBP13765 273 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 GPR85P60893 370 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 PPIAP62937 165 aaKnown RBP12.23□□□□□ -0.45
COL1A1-201ENST00000225964 SORDQ00796 357 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 MPPED2Q15777 294 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 HIST2H3PS2Q5TEC6 136 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 OR2G6Q5TZ20 316 aa12.23□□□□□ -0.45
COL1A1-201ENST00000225964 SLC22A25Q6T423 547 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms