RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Rgs21V9GXQ3 152 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Zswim8Q3UHH1 1832 aaKnown RBP14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Zfp141G3UY09 685 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gm2056J3QQ02 144 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Grk6O70293 576 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Hdac3O88895 424 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Fcgr3P08508 261 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Sod2P09671 222 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Slc1a3P56564 543 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Sox19Q62249 55 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 SpicQ6P3D7 242 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tas2r107Q7M725 308 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr128Q7TRJ1 308 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Ticam1Q80UF7 732 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Creg2Q8BGC9 288 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Rnf26Q8BUH7 424 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Hcar1Q8C131 343 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr781Q8VFZ8 311 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Stoml2Q99JB2 353 aaKnown RBP14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Park7Q99LX0 189 aaKnown RBP14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Sucnr1Q99MT6 317 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Slc15a1Q9JIP7 709 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tgm1Q9JLF6 815 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Fam170bE9PXT9 378 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Grem1O70326 184 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 P01665 111 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 P01666 111 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Itga5P11688 1053 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Dlx5P70396 289 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 TfptQ3U1J1 259 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Cdv3Q4VAA2 281 aaKnown RBP14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Slc44a5Q5RJI2 710 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gas6Q61592 674 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Epha6Q62413 1035 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr776Q7TRI3 312 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Alkbh3Q8K1E6 286 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Bhlhe41Q99PV5 410 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr44Q9EQB8 314 aa14.43□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Cdk2ap1O35207 114 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Rasd1O35626 280 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Sstr2P30875 369 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Hsd11b1P50172 292 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Defa11P50709 85 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 E2f1Q61501 430 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 RfesdQ8K2P6 157 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 C8gQ8VCG4 202 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Rps19Q9CZX8 145 aaKnown RBP14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Csnk1eQ9JMK2 416 aaKnown RBP14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr1156A2AVC3 323 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gm1330D3Z460 184 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr574F8VQ18 346 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 S1pr1O08530 382 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 FurinP23188 793 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tango2P54797 276 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Prr27Q3SYJ2 352 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Rnf149Q3U2C5 394 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Vmn1r223Q5SSA0 361 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Cdca4Q9CWM2 237 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gm28710A0A1B0GR31 962 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr115B2RTB9 312 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 MagP20917 626 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tcf7Q00417 419 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gm2aQ60648 193 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Elmod2Q8BGF6 293 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gpr157Q8C206 330 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Akr7a2Q8CG76 367 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Ube2fQ9CY34 185 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Brix1Q9DCA5 353 aaKnown RBP14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Adam23Q9R1V7 829 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Sohlh1Q6IUP1 357 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 NdnfQ8C119 568 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Adhfe1Q8R0N6 465 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Entpd4Q9DBT4 613 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tsc22d4Q9EQN3 387 aa14.42□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Igkv10-94A0A075B5L1 115 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Gm13178B1AVU7 408 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Cyp2d37-psF6YKB5 150 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 RaxO35602 342 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 P06336 421 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 CtslP06797 334 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 MatkP41242 505 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 GalP47212 124 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 St3gal3P97325 374 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Spaca9Q7TPM5 168 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr1219Q7TR04 311 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr857Q7TRF7 309 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Eif5a2Q8BGY2 153 aaKnown RBP14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Fbxw13Q8BI57 466 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Q8C4P0 716 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tmem45bQ8VCZ2 278 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Man2c1Q91W89 1039 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Mrpl21Q9D1N9 209 aaKnown RBP14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Olfr971Q9EQ96 307 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Cts8Q9JI81 333 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Lpar2Q9JL06 348 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Cml5Q9QXS8 227 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Tmem176bQ9R1Q6 263 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 Vmn1r13G5E8I3 300 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 NnmtO55239 264 aa14.41□□□□□ -0.1
Ccdc88b-201ENSMUST00000113440 P20040 264 aa14.41□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 71.6 ms