RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ASAH1Q13510 395 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 IDNKQ5T6J7 187 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 C1QL3Q5VWW1 255 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 PAMR1Q6UXH9 720 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 GRINAQ7Z429 371 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 TMEM105Q8N8V8 129 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 DUSP19Q8WTR2 217 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 THAP4Q8WY91 577 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 CCDC86Q9H6F5 360 aaKnown RBP17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 ACOXLQ9NUZ1 547 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 TAS2R10Q9NYW0 307 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 TAS2R5Q9NYW4 299 aa17.88■□□□□ 0.45
PCDHB11-202ENST00000624887 TMED7-TICAM2A0A0A6YYA0 188 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 SUSD5O60279 629 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 CFIP05156 583 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 EMP2P54851 167 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 RIN1Q13671 783 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 PEAR1Q5VY43 1037 aaPredicted RBP17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 C16orf47Q6ZP98 133 aaPredicted RBP17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 SLC16A9Q7RTY1 509 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 MAMDC2Q7Z304 686 aaPredicted RBP17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 PPP1R3BQ86XI6 285 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 ADGRG3Q86Y34 549 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 ZNF511Q8NB15 262 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 OR13C5Q8NGS8 318 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 TTYH2Q9BSA4 534 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 WDR70Q9NW82 654 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 TMED7Q9Y3B3 224 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 EXPH5Q8NEV8 1989 aa17.87■□□□□ 0.45
PCDHB11-202ENST00000624887 TRBV2A0A0J9YWF9 115 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 APEX1P27695 318 aaKnown RBP17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 THBS2P35442 1172 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 ZNF684Q5T5D7 378 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 SFXN4Q6P4A7 337 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 PAPD4Q6PIY7 484 aaKnown RBP17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 CELF2-AS1Q8N7Q2 184 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 HPS1Q92902 700 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 WDR77Q9BQA1 342 aaPredicted RBP17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 ZNF346Q9UL40 294 aaKnown RBP17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 ADAMTS9Q9P2N4 1935 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 TRAV1-2A0A0B4J238 106 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 A0A0G2JK05 382 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 TMEM72A0PK05 275 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 A8MVM7 634 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 DCTN6O00399 190 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 ZNF354AO60765 605 aaPredicted RBP17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 EDNRAP25101 427 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 RPS11P62280 158 aaKnown RBP eCLIP17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 TAB1Q15750 504 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 SGCBQ16585 318 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 FAM69AQ5T7M9 428 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 SPATC1Q76KD6 591 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 TIGD4Q8IY51 512 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 IL17RDQ8NFM7 739 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 OR2T4Q8NH00 348 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 IFI44Q8TCB0 444 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 RPS4Y2Q8TD47 263 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 UBL7Q96S82 380 aaPredicted RBP17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 SRA1Q9HD15 236 aaKnown RBP17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 FBXO4Q9UKT5 387 aa17.86■□□□□ 0.45
PCDHB11-202ENST00000624887 GATBO75879 557 aaKnown RBP17.85■□□□□ 0.45
PCDHB11-202ENST00000624887 RENP00797 406 aa17.85■□□□□ 0.45
PCDHB11-202ENST00000624887 HLA-DQB1P01920 261 aa17.85■□□□□ 0.45
PCDHB11-202ENST00000624887 FBXW4P57775 412 aa17.85■□□□□ 0.45
PCDHB11-202ENST00000624887 OR10A3P58181 314 aa17.85■□□□□ 0.45
PCDHB11-202ENST00000624887 P2RY14Q15391 338 aa17.85■□□□□ 0.45
PCDHB11-202ENST00000624887 COL28A1Q2UY09 1125 aa17.85■□□□□ 0.45
PCDHB11-202ENST00000624887 DTWD2Q8NBA8 298 aa17.85■□□□□ 0.45
PCDHB11-202ENST00000624887 CHAC2Q8WUX2 184 aa17.85■□□□□ 0.45
PCDHB11-202ENST00000624887 SPSB2Q99619 263 aa17.85■□□□□ 0.45
PCDHB11-202ENST00000624887 APMAPQ9HDC9 416 aa17.85■□□□□ 0.45
PCDHB11-202ENST00000624887 TMEM200CA6NKL6 621 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 H7C1C5 153 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 GPRIN2O60269 458 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 ARL6IP5O75915 188 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 ELK1P19419 428 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 GRPRP30550 384 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 LCN6P62502 163 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 MADCAM1Q13477 382 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 IL18Q14116 193 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 C1orf140Q5VVS0 124 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 LRRC28Q86X40 367 aaPredicted RBP17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 OR6V1Q8N148 313 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 Q8N402 240 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 OR8K3Q8NH51 312 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 STK35Q8TDR2 534 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 THAP3Q8WTV1 239 aaPredicted RBP17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 ZC3H10Q96K80 434 aaKnown RBP17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 NEDD4LQ96PU5 975 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 SLC22A4Q9H015 551 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 SLC26A1Q9H2B4 701 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 MALT1Q9UDY8 824 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 RASD1Q9Y272 281 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 TRBV11-1A0A0K0K1C0 115 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 PRR32B1ATL7 298 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 UCHL1P09936 223 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 SLC2A2P11168 524 aaPredicted RBP17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 RAB3BP20337 219 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 PSMB10P40306 273 aa17.84■□□□□ 0.45
PCDHB11-202ENST00000624887 HTR3AP46098 478 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms